Pandoraea commovens: NTU39_16020
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Entry
NTU39_16020 CDS
T08365
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00010
Glycolysis / Gluconeogenesis
pcom00020
Citrate cycle (TCA cycle)
pcom00260
Glycine, serine and threonine metabolism
pcom00280
Valine, leucine and isoleucine degradation
pcom00310
Lysine degradation
pcom00380
Tryptophan metabolism
pcom00620
Pyruvate metabolism
pcom00630
Glyoxylate and dicarboxylate metabolism
pcom00640
Propanoate metabolism
pcom00670
One carbon pool by folate
pcom00785
Lipoic acid metabolism
pcom01100
Metabolic pathways
pcom01110
Biosynthesis of secondary metabolites
pcom01120
Microbial metabolism in diverse environments
pcom01200
Carbon metabolism
pcom01210
2-Oxocarboxylic acid metabolism
pcom01240
Biosynthesis of cofactors
Module
pcom_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcom_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcom_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pcom_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NTU39_16020 (lpdA)
00020 Citrate cycle (TCA cycle)
NTU39_16020 (lpdA)
00620 Pyruvate metabolism
NTU39_16020 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NTU39_16020 (lpdA)
00640 Propanoate metabolism
NTU39_16020 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NTU39_16020 (lpdA)
00280 Valine, leucine and isoleucine degradation
NTU39_16020 (lpdA)
00310 Lysine degradation
NTU39_16020 (lpdA)
00380 Tryptophan metabolism
NTU39_16020 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NTU39_16020 (lpdA)
00670 One carbon pool by folate
NTU39_16020 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcom04147
]
NTU39_16020 (lpdA)
Enzymes [BR:
pcom01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NTU39_16020 (lpdA)
Exosome [BR:
pcom04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NTU39_16020 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
FAD_binding_2
GIDA
FAD_oxidored
AlaDh_PNT_C
NAD_binding_8
FAD_binding_3
3HCDH_N
Thi4
2-Hacid_dh_C
Lycopene_cycl
XdhC_C
DAO
Agglutinin_C
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
UVA77608
LinkDB
All DBs
Position
complement(3519032..3520474)
Genome browser
AA seq
480 aa
AA seq
DB search
MANKEFDVVVIGAGPGGYIAAIRAAQLGFSVACVEKWINPAKKMVLGGTCLNVGCIPSKA
LLASSEEFEKVGHHLADHGITTSDVKIDIAKMLTRKQGIVDKMTGGIEYLFKKNKITWLK
GEGSFVAKNDGGYQIDVKPVQEADKPETVTAKNVIIATGSKARHLPGMPVDNKLISDNEG
ALSFDTVPKKLGVIGAGVIGLELGSVWRRLGSEVTVLEAMPEFLAAADAGVAKEAAKQFK
KQGLDITVGVKVGEVKTGKNNVTVNYADKDGKEHTLEVDRLIVSVGRVPNTDNLGLGNIG
LATDERGFIPVDDHCRTKLPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIAGQKPHIDYNC
IPWVIYTSPEIAWVGKTEQQLKAEGREFKPGQFPFAANGRALGMGSSDGFVKVLADAKTD
EILGVHVIGLNASDLIAEAVVAMEFKAASEDIGRICHPHPSLSEVMREAALDVEKRALNK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagaatttgatgtagtcgttatcggcgccggccccggcgggtatatcgcc
gcgatccgcgctgcacaactcggcttctccgtcgcttgcgtcgagaagtggatcaacccg
gccaagaagatggtgctgggcggcacgtgcctgaacgtcggttgcattccgtcgaaggca
ctgcttgcgtcgtcggaagaattcgaaaaggtcggtcatcacctggccgatcacggtatc
accacgtcggatgtcaagatcgacatcgccaagatgctcacgcgcaagcaaggcatcgtc
gacaagatgaccggtggtatcgagtacctgttcaagaagaacaagatcacgtggctcaag
ggtgaaggctcgttcgttgcgaagaacgacggcggctaccagatcgacgtgaagccggtc
caggaagccgacaagccggaaacggtcacggccaagaacgtgatcatcgccacgggctcg
aaggcccgtcacctgccgggcatgccggtcgacaacaagctcatctcggataacgaaggt
gcgctctcgttcgacaccgtgccgaagaagctgggcgtgatcggcgctggcgtgatcggt
ctggaactgggttcggtgtggcgtcgtctgggctcggaagtgaccgtgctcgaagccatg
ccggaattcctggctgccgccgatgcgggcgtggccaaggaagctgccaagcagttcaag
aagcaaggtctggacatcactgtcggcgtgaaggtcggcgaagtgaagaccggcaagaac
aacgtcacggtcaactacgcggacaaggacggcaaggagcacacgctcgaagtcgatcgc
ctgatcgtgtcggtcggccgtgtgccgaacaccgacaatctgggtctgggcaacatcggt
ctggcgaccgacgagcgcggcttcattccggtggacgaccactgccgtaccaagctgccg
aacgtgtacgcgatcggtgacgtggtgcgtggcccgatgctcgcgcacaaggccgaagac
gaaggcgtgctggtggccgaagtcatcgcaggccagaagccgcacatcgactacaactgc
attccgtgggtgatctacacctcgccggaaatcgcatgggtcggcaagaccgagcagcaa
ctcaaggccgaaggccgcgagttcaagccgggtcagttcccgttcgctgccaacggccgc
gcactgggcatgggctcgtcggacggtttcgtgaaggtgctggccgatgccaagaccgac
gaaatcctcggcgtgcacgtgatcggcctgaacgcttcggacctgatcgccgaagccgtg
gtcgcgatggagttcaaggcggcgtcggaagacatcggccgtatctgccatccgcacccg
tcgctgtcggaagtgatgcgtgaagccgccctcgatgtcgagaagcgtgcactgaacaag
taa
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