KEGG   Pandoraea commovens: NTU39_16020
Entry
NTU39_16020       CDS       T08365                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pcom  Pandoraea commovens
Pathway
pcom00010  Glycolysis / Gluconeogenesis
pcom00020  Citrate cycle (TCA cycle)
pcom00260  Glycine, serine and threonine metabolism
pcom00280  Valine, leucine and isoleucine degradation
pcom00310  Lysine degradation
pcom00380  Tryptophan metabolism
pcom00620  Pyruvate metabolism
pcom00630  Glyoxylate and dicarboxylate metabolism
pcom00640  Propanoate metabolism
pcom00670  One carbon pool by folate
pcom00785  Lipoic acid metabolism
pcom01100  Metabolic pathways
pcom01110  Biosynthesis of secondary metabolites
pcom01120  Microbial metabolism in diverse environments
pcom01200  Carbon metabolism
pcom01210  2-Oxocarboxylic acid metabolism
pcom01240  Biosynthesis of cofactors
Module
pcom_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pcom_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcom_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pcom_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pcom00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NTU39_16020 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NTU39_16020 (lpdA)
   00620 Pyruvate metabolism
    NTU39_16020 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NTU39_16020 (lpdA)
   00640 Propanoate metabolism
    NTU39_16020 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NTU39_16020 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NTU39_16020 (lpdA)
   00310 Lysine degradation
    NTU39_16020 (lpdA)
   00380 Tryptophan metabolism
    NTU39_16020 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NTU39_16020 (lpdA)
   00670 One carbon pool by folate
    NTU39_16020 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcom04147]
    NTU39_16020 (lpdA)
Enzymes [BR:pcom01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NTU39_16020 (lpdA)
Exosome [BR:pcom04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NTU39_16020 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_binding_2 GIDA FAD_oxidored AlaDh_PNT_C NAD_binding_8 FAD_binding_3 3HCDH_N Thi4 2-Hacid_dh_C Lycopene_cycl XdhC_C DAO Agglutinin_C Amino_oxidase
Other DBs
NCBI-ProteinID: UVA77608
LinkDB
Position
complement(3519032..3520474)
AA seq 480 aa
MANKEFDVVVIGAGPGGYIAAIRAAQLGFSVACVEKWINPAKKMVLGGTCLNVGCIPSKA
LLASSEEFEKVGHHLADHGITTSDVKIDIAKMLTRKQGIVDKMTGGIEYLFKKNKITWLK
GEGSFVAKNDGGYQIDVKPVQEADKPETVTAKNVIIATGSKARHLPGMPVDNKLISDNEG
ALSFDTVPKKLGVIGAGVIGLELGSVWRRLGSEVTVLEAMPEFLAAADAGVAKEAAKQFK
KQGLDITVGVKVGEVKTGKNNVTVNYADKDGKEHTLEVDRLIVSVGRVPNTDNLGLGNIG
LATDERGFIPVDDHCRTKLPNVYAIGDVVRGPMLAHKAEDEGVLVAEVIAGQKPHIDYNC
IPWVIYTSPEIAWVGKTEQQLKAEGREFKPGQFPFAANGRALGMGSSDGFVKVLADAKTD
EILGVHVIGLNASDLIAEAVVAMEFKAASEDIGRICHPHPSLSEVMREAALDVEKRALNK
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcaaacaaagaatttgatgtagtcgttatcggcgccggccccggcgggtatatcgcc
gcgatccgcgctgcacaactcggcttctccgtcgcttgcgtcgagaagtggatcaacccg
gccaagaagatggtgctgggcggcacgtgcctgaacgtcggttgcattccgtcgaaggca
ctgcttgcgtcgtcggaagaattcgaaaaggtcggtcatcacctggccgatcacggtatc
accacgtcggatgtcaagatcgacatcgccaagatgctcacgcgcaagcaaggcatcgtc
gacaagatgaccggtggtatcgagtacctgttcaagaagaacaagatcacgtggctcaag
ggtgaaggctcgttcgttgcgaagaacgacggcggctaccagatcgacgtgaagccggtc
caggaagccgacaagccggaaacggtcacggccaagaacgtgatcatcgccacgggctcg
aaggcccgtcacctgccgggcatgccggtcgacaacaagctcatctcggataacgaaggt
gcgctctcgttcgacaccgtgccgaagaagctgggcgtgatcggcgctggcgtgatcggt
ctggaactgggttcggtgtggcgtcgtctgggctcggaagtgaccgtgctcgaagccatg
ccggaattcctggctgccgccgatgcgggcgtggccaaggaagctgccaagcagttcaag
aagcaaggtctggacatcactgtcggcgtgaaggtcggcgaagtgaagaccggcaagaac
aacgtcacggtcaactacgcggacaaggacggcaaggagcacacgctcgaagtcgatcgc
ctgatcgtgtcggtcggccgtgtgccgaacaccgacaatctgggtctgggcaacatcggt
ctggcgaccgacgagcgcggcttcattccggtggacgaccactgccgtaccaagctgccg
aacgtgtacgcgatcggtgacgtggtgcgtggcccgatgctcgcgcacaaggccgaagac
gaaggcgtgctggtggccgaagtcatcgcaggccagaagccgcacatcgactacaactgc
attccgtgggtgatctacacctcgccggaaatcgcatgggtcggcaagaccgagcagcaa
ctcaaggccgaaggccgcgagttcaagccgggtcagttcccgttcgctgccaacggccgc
gcactgggcatgggctcgtcggacggtttcgtgaaggtgctggccgatgccaagaccgac
gaaatcctcggcgtgcacgtgatcggcctgaacgcttcggacctgatcgccgaagccgtg
gtcgcgatggagttcaaggcggcgtcggaagacatcggccgtatctgccatccgcacccg
tcgctgtcggaagtgatgcgtgaagccgccctcgatgtcgagaagcgtgcactgaacaag
taa

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