Pandoraea commovens: NTU39_16200
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Entry
NTU39_16200 CDS
T08365
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pcom
Pandoraea commovens
Pathway
pcom02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTU39_16200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_16200
Transporters [BR:
pcom02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NTU39_16200
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_22
ABC_ATPase
AAA
Rad17
SMC_N
AAA_25
AAA_19
AAA_30
nSTAND1
nSTAND3
AAA_16
RsgA_GTPase
nSTAND_NTPase5
NB-ARC
AAA_5
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
UVA77641
UniProt:
A0ABY5QA49
LinkDB
All DBs
Position
complement(3561073..3562167)
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AA seq
364 aa
AA seq
DB search
MSFLTLTDVSKTFGELNAVSNVNLSVEKGEFVSLLGPSGCGKTTTLQMIAGFVEATTGRI
TLDGRDITNMRPNKRGLGIVFQSYALFPHMTVADNVGFGLEMRGVDKSERKDRIREALAL
VRLEALGHRFPRELSGGQRQRVAIARAVVIAPPVLLLDEPMSNLDAKLREDMQFELRSIQ
RKIGTTTIMVTHDQSEALSISDRVVVMEAGRITQVDTPYRAYERPETPFVSQFIGKANML
DGRVAARDGEHLHIELGAQLTQRAALADLAPRDRGMAVGDAITMCLRPEKVRLCAPSTGR
LSATVTSRFFLGSQWLYRVDSALGEVLVCCQNEGGEPLSEGAPVGLDWQPEAVRFVSAGA
CSNG
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttctgactttgacggatgtttccaagacgtttggcgagctgaatgccgtctcg
aacgtcaatctctcggtggagaagggcgagttcgtctcgctgctcggcccctcgggctgc
ggcaagaccaccacgttgcagatgatcgcgggcttcgtcgaagccacgaccgggcgcatt
acgctcgacgggcgcgacatcacgaacatgcggccgaacaagcgcggtctgggcatcgtg
ttccagagctacgcgctgttcccgcacatgaccgtggcggataacgtcggattcggtctg
gagatgcgaggcgtcgacaagtcggaacgtaaggaccgcattcgcgaagcgctcgcgctc
gtgcggctcgaagcgctcggtcatcgcttcccgcgtgagctctcgggcggccagcgtcag
cgcgtggccatcgcgcgcgccgtggtgatcgcgccgccggtgctgctgctcgacgagccg
atgtccaacctcgacgccaagctgcgcgaagacatgcagttcgaactgcgttcgatccag
cgtaagatcggcacgaccaccatcatggtgacgcacgaccaatccgaagcgctgtcgatc
agcgatcgcgttgtggtcatggaagccggacgcatcacgcaggtcgacacgccgtaccgt
gcttacgagcgtccggaaacgccgttcgtctcgcagttcatcggcaaggcgaacatgctc
gacgggcgtgtggccgcgcgcgacggcgagcatctgcatattgaactgggcgcgcaactc
acgcagcgtgctgcgctcgccgacctcgcaccgcgcgaccgtggcatggcggtgggcgac
gccatcaccatgtgcctgcgtccggaaaaggtgcgtttgtgcgccccgtcgaccggccgt
ctgtcggcgacggtcacaagccgcttcttcctcggtagccagtggctgtaccgcgtcgac
agcgcgctgggcgaggtgctcgtgtgctgccagaacgaaggcggtgagccgttgagcgaa
ggggcgccggtcggtctggactggcagccggaggcggtgcgtttcgtttccgcaggagcg
tgctcgaatggctga
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