Pandoraea commovens: NTU39_16830
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Entry
NTU39_16830 CDS
T08365
Name
(GenBank) FAD-binding protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00020
Citrate cycle (TCA cycle)
pcom00190
Oxidative phosphorylation
pcom00650
Butanoate metabolism
pcom00720
Other carbon fixation pathways
pcom01100
Metabolic pathways
pcom01110
Biosynthesis of secondary metabolites
pcom01120
Microbial metabolism in diverse environments
pcom01200
Carbon metabolism
Module
pcom_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcom_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcom_M00149
Succinate dehydrogenase, prokaryotes
pcom_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NTU39_16830
00650 Butanoate metabolism
NTU39_16830
09102 Energy metabolism
00190 Oxidative phosphorylation
NTU39_16830
00720 Other carbon fixation pathways
NTU39_16830
Enzymes [BR:
pcom01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NTU39_16830
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
FAD_binding_3
FAD_oxidored
HI0933_like
GIDA
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
UVA77750
LinkDB
All DBs
Position
complement(3687217..3688953)
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AA seq
578 aa
AA seq
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MRVIDCDVVVVGGGGAGTYAALRLHDLGLKPMLISKGLVGKSGASIMAGAVIVGSKMLGG
NAQNAASSLEFFAKYYSHFLVDQSYLAAAGHWIENTFYPEMESLGLLFSREADGQIAMSH
SPVRWAVAPMQGQTGILLMDIRRKQLQARGIPMHEECVVTALLRNENGEVCGLTALDYVR
GEMFAVHAKAVVMATGHADRMVRRSTGTREQTGDGIALALRAGAEMTNLEMQFWHISDFA
HPPTWQRLHIYPNPLVGTDQSSRVYNAQGECFFEQSRDAPAALAPYTLQVKRLTQQVLAG
KAHFSGGYYTSYSHVDAEVLRRYQYAGSAFEKLGLDITRDRVEARTTMHYRQGGIESDPH
SMRTSVDGLWVAGGVGAHVTGSLAVAIYDGGLVAESIAGSLPDRHRHDGMTEQQIRAEEA
RVEGVRHRAADSAAGQQTLAPMHVKTGIWDVMDEAYGLIKSGNTMRTGLARLAAMREREL
PRMTPPSASRRFNTAWLDALDAHNLIDVCEVTLQSALKREESRGSFYRTDFPYVDNTAWQ
CKNIVARDGSAYRFRRERYPEGAIAPGFERQEYFSVPW
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgatcgattgcgatgtcgtagtcgtgggcggcggcggtgcaggcacttacgcc
gcgctgcgtctgcacgacctgggattgaagccgatgttgatctcgaagggtctggtcggc
aagagcggtgcgtcgatcatggccggggcggtgatcgtcggctcgaagatgctcggcggc
aacgcgcagaacgccgccagttcgctcgaattcttcgcgaagtactacagccactttctg
gtcgatcagtcgtatctggcggccgcggggcactggatcgagaacaccttctatccggag
atggagtcgctcggtttgctgttttcgcgggaggccgacgggcagatcgccatgagccac
tcgccggtgcgctgggcggtcgcgcccatgcagggacagaccggcatcttgctgatggat
atccgacgcaagcagttacaggcacgcggcattccgatgcatgaggaatgcgtcgtgacg
gcgttgctgcgcaatgagaacggcgaagtttgcgggctgactgcgctcgactacgtgcgc
ggcgagatgtttgcggtgcatgccaaggctgtcgtgatggcgaccgggcacgccgaccgg
atggtgcgtcgctcaacgggaacgcgggagcagaccggtgacggcattgcgctggcactg
cgcgcgggggccgagatgaccaatctggagatgcagttctggcacatcagcgactttgca
catccaccgacctggcagcgtctgcacatctatccgaatccgctggtcggcaccgaccag
agttcgcgtgtgtacaacgcgcaaggtgagtgcttcttcgagcagtcgcgcgacgcgcct
gctgcgcttgcgccttacacgcttcaggtcaagcgactcacgcagcaggtgctcgcgggc
aaggcgcatttcagtggcggctattacacgtcttacagccatgtcgatgcggaagtgttg
cggcgttaccagtacgccggttcggcgttcgagaagctggggctagacatcacgcgcgac
agggtcgaagcgcgcaccacgatgcattaccggcaaggcggtatcgagtcggatcctcat
tcgatgcgcaccagtgtcgacggattgtgggtcgcagggggcgtgggcgcgcatgtcacg
gggagtctggccgtcgcgatttacgacggcgggctggtggccgagtcgattgctggcagc
ttgccggaccgacatcgtcacgacggcatgaccgagcagcagattcgggcggaagaagcg
cgggtggagggggtgaggcaccgagccgccgacagcgcggctggtcagcagacgcttgcc
cccatgcacgtcaagaccggtatctgggacgtgatggacgaggcgtacggactgatcaag
agcggcaacaccatgcgcaccggtctggcaaggcttgcggcgatgcgcgagcgcgagctg
ccgcgcatgacgccgccgagcgcctcgcgtcggttcaacaccgcgtggctcgatgcgctc
gacgcccacaacctgatcgacgtgtgtgaagtcacgctgcaaagcgcgttgaagcgagag
gagagccggggaagtttctaccgcacggactttccgtacgtcgataacacggcatggcag
tgcaagaacatcgtcgcgcgcgacggcagcgcttaccggttccggcgggagcgatatccc
gagggggccatcgcgccgggattcgagcggcaggagtatttcagcgtgccgtggtga
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