Pandoraea commovens: NTU39_16850
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Entry
NTU39_16850 CDS
T08365
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03030
DNA replication
pcom03430
Mismatch repair
pcom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NTU39_16850
03430 Mismatch repair
NTU39_16850
03440 Homologous recombination
NTU39_16850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcom03032
]
NTU39_16850
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_16850
Enzymes [BR:
pcom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NTU39_16850
DNA replication proteins [BR:
pcom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NTU39_16850
DNA repair and recombination proteins [BR:
pcom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NTU39_16850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Peripla_BP_3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UVA77754
UniProt:
A0ABY5QAW5
LinkDB
All DBs
Position
3694446..3695066
Genome browser
AA seq
206 aa
AA seq
DB search
MQTVAILDFETTGLSPTQGDRATEIAVILLRDGEIVDRYQSLMNAGRRIPSDVAALTGIT
NDMIASAPPVSQVMREAAQFVGNCPVVAHNAGFDKRFWQAELAMLGERSDHVFACTMLTA
RRLYPHAQNHRLSSLADLLQLPKTGRAHRAMVDAEMTTHLWRRMHDDISRTYGLKRVDHA
LIARVQTTSKDKVPTLLRSLAQGTTA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagtagcgatcctcgacttcgaaaccaccggtctgtcgccgacacagggcgac
cgggcgacggaaatcgccgtcatcctgttgcgtgacggggaaattgtcgatcgctatcag
agtttgatgaatgccggacggcgtattccgtcggacgtcgccgcgctcacgggcattacg
aacgacatgattgcgagcgcaccgcccgtctcgcaggttatgcgcgaggcagcgcagttc
gtcggcaactgcccggtcgtcgcgcacaatgccgggtttgacaaacgcttctggcaagct
gaactcgccatgctgggcgagcgctcggatcacgtcttcgcctgcacgatgctgaccgcc
agacgcctctacccgcacgcccagaatcaccgcctctccagcctcgccgatcttctccag
cttccgaagaccggtcgtgcccaccgggcgatggtcgacgccgagatgacgacccacctc
tggcgccgcatgcacgacgacatctcacgcacctacgggctcaaacgcgtggatcacgcg
ctgatcgcccgcgtgcaaaccaccagcaaggacaaagtgccgacgttgttgcgctcactc
gcgcaaggtacgacggcataa
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