Pandoraea commovens: NTU39_16930
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Entry
NTU39_16930 CDS
T08365
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pcom
Pandoraea commovens
Pathway
pcom02020
Two-component system
pcom02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NTU39_16930
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTU39_16930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcom03000
]
NTU39_16930
Transcription factors [BR:
pcom03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
NTU39_16930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
TrmB
HTH_24
GntR
HTH_20
HTH_36
RepL
EAP30
Motif
Other DBs
NCBI-ProteinID:
UVA77769
LinkDB
All DBs
Position
3712948..3713619
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AA seq
223 aa
AA seq
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MSLETLLQRSAWAQGLTPDQRARVVAEIQVRPVENGGYVCRKGDPTHAWFGVIEGLVKIT
TASASGKTVTFTGVPAGAWFGEGSVLKHEIRKYDVMALRDSVLAHMPIATFDWLLDTSIP
FNRFLTLQLNERLGQFIAAVEHERLLDTDARVARSLSSMFNPNLYPSDDNTVQISQEELS
YLAGVSRQRVNLALKVLEQAGLVKVDYGVLTILDLEGLREFGM
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgaaaccttgttgcagcgcagcgcctgggcgcaaggactgacgcccgatcag
cgcgcacgcgtggtggcggagattcaggtgcgtccggtcgaaaacgggggctatgtttgc
cgcaagggcgacccgacgcacgcatggttcggggtgatcgaggggttggtgaagatcacg
acagcgtcggccagcggcaaaacagtgacgttcacgggcgtgccagccggcgcgtggttc
ggggaagggtcggtgctcaagcacgagatccggaaatatgacgtcatggcgctgcgcgac
tcggtgctcgcgcatatgcccatcgccaccttcgactggcttctcgacacgagcattccg
ttcaatcgctttctgacgctgcaactcaacgaacggctggggcaattcattgcggccgtc
gagcacgagcgtctgctcgataccgatgcccgcgtcgcccgttcgctgtcgtcgatgttc
aatccgaacctgtatccgtccgacgacaacaccgtgcagatctcacaagaggaactgagt
taccttgcgggcgtttcgcgccagcgcgtcaaccttgcgttgaaggtgctggagcaggcg
ggtttggtcaaagtcgattacggcgtgctgactattctcgatctggaagggttgcgcgag
ttcggcatgtaa
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