Pandoraea commovens: NTU39_17340
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Entry
NTU39_17340 CDS
T08365
Symbol
prpB
Name
(GenBank) methylisocitrate lyase
KO
K03417
methylisocitrate lyase [EC:
4.1.3.30
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00640
Propanoate metabolism
pcom01100
Metabolic pathways
pcom01120
Microbial metabolism in diverse environments
pcom01200
Carbon metabolism
Module
pcom_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NTU39_17340 (prpB)
Enzymes [BR:
pcom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.30 methylisocitrate lyase
NTU39_17340 (prpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP_mutase
ICL
Motif
Other DBs
NCBI-ProteinID:
UVA77849
UniProt:
A0A5E4SZL9
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All DBs
Position
complement(3825587..3826477)
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AA seq
296 aa
AA seq
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MTQTIRSAGAAFREAVKTEQPLQVVGAINANHALLAKAAGFKAIYLSGGGVAAGSLGLPD
LGISTLDDVLTDVRRITDVCDLPLLVDVDTGFGPSAFNIARTVQSLIKFGAGAMHIEDQV
GAKRCGHRPGKAIVTQQEMVDRIKAAVDARTDENFVIMARTDALAVEGLQAAIDRACACV
EAGADMIFPEAMTELPMYRQFSDAVKVPVLANITEFGSTPLFTVEELKSAQVGLVLYPLS
AFRAMNKAAENVYHTIRRDGTQKAVLDTMQTRAELYESIGYHAYEQKLDALFAQQK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaaaccattcgttcggccggcgccgccttccgcgaggccgtcaagaccgagcaa
ccgttgcaggttgtcggtgccatcaatgccaaccacgccctgctcgccaaggcggccggt
ttcaaggcgatctatctgtcgggcggcggtgttgcggccggttcgctcggcctgcccgat
ctgggcatctcgacgctcgacgacgtgctcaccgatgtgcgccgcatcaccgacgtatgc
gacctgccgctgctggtggacgtcgacacgggcttcggtccgtcggccttcaacatcgcg
cgcacggtgcagtcgctgatcaagttcggcgcgggggcgatgcatatcgaagatcaggtg
ggcgcgaagcgctgcggccaccgtcccggcaaggccatcgtgacgcagcaggagatggtc
gaccgcatcaaggcggccgtcgacgcgcgcaccgacgagaatttcgtcatcatggcgcgc
accgatgcgctggccgtcgaaggccttcaggcggccatcgaccgcgcgtgcgcgtgcgtt
gaagcgggggccgacatgatcttccccgaagcgatgacggaactgccgatgtaccgccag
ttttccgatgccgtgaaggtgcccgtgctcgcgaacatcaccgagttcggctcgacgccg
ctgttcaccgtggaagaactcaagagcgcgcaggtcggactggtgctgtatccgctctcg
gcgttccgcgcgatgaacaaggcggcggaaaacgtctatcacacgattcgtcgcgacggc
acgcaaaaggcggtgctcgacacgatgcaaacgcgcgccgagctctatgagagcatcggc
taccacgcatacgaacagaagctcgacgccctgttcgcccaacagaaataa
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