Pandoraea commovens: NTU39_17560
Help
Entry
NTU39_17560 CDS
T08365
Name
(GenBank) polyprenyl synthetase family protein
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00900
Terpenoid backbone biosynthesis
pcom01100
Metabolic pathways
pcom01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NTU39_17560
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcom01006
]
NTU39_17560
Enzymes [BR:
pcom01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NTU39_17560
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NTU39_17560
Prenyltransferases [BR:
pcom01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NTU39_17560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UVA77888
LinkDB
All DBs
Position
complement(3878974..3879870)
Genome browser
AA seq
298 aa
AA seq
DB search
MADQNIKAWMQAVQARVEQALDAALPKATDGGSARLNESMRYAVLGGGKRVRPLLCFAAG
EVTQASETALDRAACAVEMIHAYSLVHDDLPCMDDDDLRRGKPTVHVQYDEATGLLAGDG
LQTQAFALLGEATGDLSAAQSLALVRELALASGALGMAGGQAIDLESVGIKLTQSQLENM
HRLKTGALLRASLRMGAICGRALSDDETVALDAYAAAVGLAFQVVDDILDTTADSATLGK
TAGKDAANDKPTYVSLMGLDGARGYAEKLRADAHAASASLGNADRLRALADYVVDRIN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagaatatcaaggcctggatgcaggcagtacaggcccgtgtggaacaggcg
ctcgacgctgcgctgcccaaggcgaccgatggcggctcggcgcgactcaacgagtcgatg
cgttacgccgtgctcggtggcggcaagcgggtgcgcccgctgctgtgcttcgctgcgggc
gaagtgacgcaggccagcgagacggcgctcgatcgcgcggcatgcgccgtcgaaatgatt
catgcgtattcgctggtgcacgacgatctgccgtgcatggacgatgacgacctgcgccgt
ggcaagccgacggtgcacgtgcagtacgacgaagcgaccggtctgctcgccggcgacggt
ctgcagacgcaggccttcgcgctgttgggcgaggcaacgggcgatctgagcgcagcgcag
tcgcttgcgctggtgcgcgaactggcgctggcttcgggtgcgctcggtatggcaggcggt
caggccatcgatctggaaagcgtgggcatcaagctcacgcagtcgcaactggaaaacatg
catcgcctgaagacgggcgcattgctgcgtgcttcgctgcgtatgggcgctatctgtggc
cgcgcgctgtcggacgacgaaacggtcgcgctcgacgcctacgcggcagccgtcggactg
gctttccaggtggtggacgacattctcgacacgacggccgactcggccacgctgggcaag
accgcaggcaaggacgccgccaacgacaagccgacctacgtgtcgctgatgggcctcgat
ggcgcacgcggctacgcggaaaagctgcgtgccgatgcgcatgcagcgagtgcgtcgctg
ggtaacgcggatcgtctgcgtgcactggccgattacgttgtcgatcgcattaattga
DBGET
integrated database retrieval system
