Pandoraea commovens: NTU39_19885
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Entry
NTU39_19885 CDS
T08365
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NTU39_19885 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcom03019
]
NTU39_19885 (groL)
03110 Chaperones and folding catalysts [BR:
pcom03110
]
NTU39_19885 (groL)
03029 Mitochondrial biogenesis [BR:
pcom03029
]
NTU39_19885 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcom04147
]
NTU39_19885 (groL)
Enzymes [BR:
pcom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NTU39_19885 (groL)
Messenger RNA biogenesis [BR:
pcom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NTU39_19885 (groL)
Chaperones and folding catalysts [BR:
pcom03110
]
Heat shock proteins
HSP60 / Chaperonin
NTU39_19885 (groL)
Mitochondrial biogenesis [BR:
pcom03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NTU39_19885 (groL)
Exosome [BR:
pcom04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NTU39_19885 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NTU39_19885 (groL)
Exosomal proteins of breast cancer cells
NTU39_19885 (groL)
Exosomal proteins of colorectal cancer cells
NTU39_19885 (groL)
Exosomal proteins of bladder cancer cells
NTU39_19885 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
UVA78309
UniProt:
A0A5E4XYM0
LinkDB
All DBs
Position
complement(4417160..4418806)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVVFGDAARSKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVAAAIEELRKISKPCTTNKEIAQVGSISANSDTSIGDYIAKAMDKVGKEGVITVEDG
KSLQDELDVVEGMQFDRGYLSPYFINTPEKQVAILENPFVLLFDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEIGLTLEKATLAELGQAKRIEIGKENTIIIDGAGEAVNIEARVKQIRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARVAVSDLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVANVVAGKGNYGYNA
SSGEYGDLVEMGVVDPTKVTRTALQNAASVSGLLLTTDCAVAELPKEDAPMAGGMGDMGG
MGGMGMGM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcgttttcggcgatgccgctcgttccaagatggttgagggtgtc
aacatcctcgccaacgccgtcaaggtgaccctgggcccgaagggccgtaacgtcgtgctc
gagcgcagcttcggcggcccgaccgtgaccaaggacggtgtgtcggtcgccaaggaaatc
gaactcaaggacaagctccagaacatgggcgcgcaaatggtcaaggaagtggcttccaag
accagcgacaacgccggcgacggtaccaccaccgcaacggtgctggctcagtcgatcgtt
cgcgaaggcatgaagtacgttgcctcgggcatgaacccgatggacctgaagcgcggtatc
gacaaggctgtcgccgctgctatcgaagaactgcgcaagatcagcaagccctgcaccacg
aacaaggaaatcgctcaagtcggctcgatctcggccaacagcgacacctcgatcggtgac
tacattgccaaggcaatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctgcaagacgagctggacgtcgtcgaaggtatgcaattcgaccgcggctacctc
tcgccgtacttcatcaacaccccggaaaagcaagtcgcgatcctggagaacccgttcgtc
ctgctgttcgacaagaaggtgtcgaacatccgtgacctgctgccggtgctcgagcaagtc
gccaaggctggccgtccgctgctgatcatcgccgaagacgtcgagggcgaagccctggca
acgctggtggtcaacaacatccgtggcatcctgaagacctgcgccgtcaaggccccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggccaggtc
atcgccgaagaaatcggcctgacgctggaaaaggccacgctggctgagctgggtcaagcc
aagcgcatcgaaatcggcaaggaaaacaccatcatcatcgatggcgccggtgaagctgtg
aacatcgaagcgcgcgtcaagcagatccgcgcccagatcgaagaagccaccagcgactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gtcggtgctgcgaccgaagtcgaaatgaaggaaaagaaggcacgcgtggaagacgcgctg
cacgctacccgcgctgctgtggaagaaggcatcgtcccgggcggcggcgttgcactgctg
cgtgctcgcgtggccgtgtcggacctcaagggtgccaacgctgaccaggacgccggtatc
aagatcgtgctgcgcgcgatggaagagccgctgcgtcagatcgtcaccaacggtggcgaa
gaagccagcgtcgtcgtggctaacgttgttgcaggcaagggcaactacggctacaacgca
tcgtcgggcgagtacggcgatctggtggaaatgggggttgtggacccgaccaaggtcacc
cgcaccgcactgcaaaacgccgcttcggtgtcgggcctgctcctgacgaccgactgcgcc
gttgccgaactgccgaaggaagatgctccgatggccggcggtatgggcgacatgggcggt
atgggcggcatgggcatgggcatgtaa
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