Pandoraea commovens: NTU39_20290
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Entry
NTU39_20290 CDS
T08365
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00910
Nitrogen metabolism
pcom01100
Metabolic pathways
pcom01120
Microbial metabolism in diverse environments
pcom01310
Nitrogen cycle
Module
pcom_M00531
Assimilatory nitrate reduction, nitrate => ammonia
pcom_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
NTU39_20290 (nirB)
Enzymes [BR:
pcom01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
NTU39_20290 (nirB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
Rubredoxin_C
NIR_SIR_ferr
DAO
Pyr_redox_3
Amino_oxidase
NAD_binding_9
NAD_binding_7
AlaDh_PNT_C
NAD_binding_8
Lycopene_cycl
3HCDH_N
GIDA
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
UVA78379
LinkDB
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Position
complement(4507501..4509978)
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AA seq
825 aa
AA seq
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MRKPRLVVIGNGMAGIRTLEELLEIAPNQYDITVFGAEPHPNYNRILLSPVLAGEQAFKD
IVLNPLDWYAEKGITLHLGREVTQIDRRSRVVRCADGTEAPYDRLLIATGSSPFILPVPG
KDLDGVISYRDIRDTEIMIETAKVKRHAVVIGGGLLGLEAANGLKLRGMDVTVVHLADTL
LERQLDSTAGKLLQQSLEARGLAFRLSHQTSEILGDDNRCVRAVKFSNGDEIAADLVVMA
AGIRPNTTLAEAAGLHCARGIVVSDTLQTYDPRIYAVGECVSHRGVAYGLVAPLFEQAKV
CANHLALMGIGSYRGSVLSTKLKVTGIDLFSAGDFLGGEGTEEIVLSDPASGVYKKLVIR
DDKLVGACLYGDTADGAWYFKLLREGRTLGELRERIMFGESSVGDVGTQGQNRASAMADT
DEVCGCNGVCKGTIVKAITEKGLFTLDEVKKHTKAASSCGSCAGLCEQILMSTLGSTYDA
APKEKAVCGCTDLSHADVRRAVREHRLTTHRAAFDFLEWRTPNGCATCRPALNYYMLSTW
PKEAVDDPQSRFVNERVHANIQKDNTFSVIPQMKGGVTNASELRRIADVADKYQIPMVKV
TGGQRIDLLGVKKDDLVNVWRDLGMPSGHAYGKSIRTVKTCVGSEFCRFGTQNSTQMGID
LETMLANMWSPHKVKLAVSGCPRNCAEAGIKDVGVIAVDSGWELYVGGNGGIKTEVAQFL
VKVKTAEEVKEYTGAFLQLYREEAYYLDRTVHYLDRVGLDYVKQRVVADAANRRALYERL
LFSLDGLPDPWQARINGAQANEYRPLTATAQSATPADVATETTTA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacctcgtctggtcgtcatcggcaacggcatggccggcatccgcacgctcgaa
gagctgcttgagattgcaccgaaccaatacgacatcaccgtgttcggcgccgagccgcat
ccgaactacaaccgtatcctgctctcgccggtgctcgctggcgaacaggcgttcaaggac
atcgtgctcaatccgctcgactggtatgcggagaagggcatcacgttgcatctgggccgc
gaagtcacgcagatcgaccgtcggagccgtgtggtgcgctgtgccgacggcaccgaagcg
ccttacgaccgtctgctcatcgcgaccggctccagcccgttcattctgccggtgccgggc
aaggatctcgatggtgtgatcagctatcgcgacatccgcgacaccgaaatcatgatcgag
acggccaaggtgaagcgtcacgcggtcgtgatcggcggtggactgctcggtctggaggcg
gccaacggcctgaaactgcgcggcatggacgtcacggtcgtgcatctggccgacacgctg
ctcgagcgtcagttggacagcacggcgggcaagctgctgcaacagtcgctcgaagcgcgc
ggcctcgcgttccgtctgtcgcatcagacgtccgagattctcggcgacgacaaccgctgc
gtgcgcgccgtgaagttcagcaacggcgacgaaatcgcggcggatctcgtggtgatggcc
gcaggcatccgcccgaataccacgctggcggaagcggccggtttgcactgcgcacgcggc
atcgtggtgtcggacacgctgcaaacctacgatccgcgcatctacgccgtgggcgaatgc
gtgagccatcgcggcgtggcgtacggtctcgtcgcgccgttgttcgagcaggccaaggtc
tgcgcgaatcacctcgcgttgatgggcatcggcagctatcgcggctcggtgctctccacg
aagctcaaggtcacgggcatcgatctgttctcggcgggcgactttctgggcggcgagggc
acggaggaaatcgtgctgtcggacccggcgagcggcgtctacaagaagctcgtgattcgc
gacgacaagctcgtcggcgcctgtctgtatggcgacacggcggacggcgcgtggtacttc
aagctgctgcgcgaagggcgcacgctgggcgagttgcgcgagcgcatcatgtttggcgag
tcgagcgtgggcgacgtcggcacgcaagggcagaaccgcgcgtcggccatggccgatacc
gacgaggtctgcggttgcaacggcgtttgcaagggcaccattgttaaggccatcaccgag
aagggcctgttcacgctcgacgaagtgaagaagcacaccaaggccgccagttcctgcggc
tcgtgcgcagggctgtgcgaacagattctgatgagcacgctcggttcgacctacgacgcc
gcgccgaaggagaaggccgtgtgcggctgcaccgacctgtcgcacgcagatgtgcgtcgt
gcggtgcgcgagcatcgcctgaccacgcaccgcgccgccttcgacttcctcgaatggcgc
acgcccaacggctgcgcaacgtgccgtccggcgctgaactactacatgctcagcacgtgg
ccgaaggaagcggtggacgatccgcaaagccgcttcgtcaacgaacgcgtgcacgccaac
atccagaaggacaacacgttctccgtcatcccgcagatgaagggcggtgtgacgaatgcg
agcgaactgcgccgcattgcagatgtggccgacaagtatcagattccgatggtcaaggtc
acgggcggtcagcgcatcgacttgctcggcgtgaagaaggacgatctggtgaacgtgtgg
cgcgatctgggtatgccgtcgggtcacgcttacggcaagtcgatccgcacggtgaagacg
tgtgtgggcagcgagttctgccgcttcggcacgcagaacagcacgcagatgggcatcgat
ctggagacgatgctcgcgaacatgtggtcgccgcacaaggtgaagctggccgtgtcgggc
tgcccgcgcaactgcgccgaagccgggatcaaggacgtgggcgtgattgccgtcgactcg
ggctgggagctgtatgtgggcggcaacggcggcatcaagacggaagtggcgcagttcctc
gtgaaggtgaagacggccgaggaggtcaaggagtacaccggcgcgttccttcagttgtat
cgtgaggaagcctactacctcgaccgaacggtgcattacctcgatcgcgtgggcctcgat
tacgtgaagcagcgcgtggtggcggacgccgccaatcgtcgtgccctgtatgagcgtctg
ttgttctcgctcgacggactgcccgacccgtggcaggcgcgtatcaacggcgcgcaagcc
aacgagtaccggccgctcacggcgacggcgcagagcgcaacgcctgccgacgtcgcgacc
gaaaccacgactgcctga
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