Pandoraea commovens: NTU39_20520
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Entry
NTU39_20520 CDS
T08365
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
pcom
Pandoraea commovens
Pathway
pcom00230
Purine metabolism
pcom01100
Metabolic pathways
pcom01110
Biosynthesis of secondary metabolites
Module
pcom_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
NTU39_20520 (purD)
Enzymes [BR:
pcom01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
NTU39_20520 (purD)
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GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp
CPSase_L_D2
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_2
ATP-grasp_5
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
UVA78421
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Position
4560071..4561348
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AA seq
425 aa
AA seq
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MKIMVVGSGGREHALAWKLAQSPRIQLVYVAPGNGGTALDERLRNVPISDPNVLAEFAAR
EGIALTVVGPETPLAAGIVNIFRARGLKIFGPTKEAAQLESSKDFAKAFMKRHGIPTADY
ETFADAAAAHAYIDAKGAPIVIKADGLAAGKGVVVAMSLEEAHNAVDMMLADNKLGDAGA
RVVIEEFLQGEEASFIVMVDGKNVLPLATSQDHKRLLDNDQGPNTGGMGAYSPAPIVTPQ
IHAKVMREIIMPTVRGMETDGIRFTGFLYAGLMIDADGNVKTLEFNCRMGDPETQPIMAR
LKGDFSVVVEHAIAGTLDKIELDWDRRYALGVVLAAHGYPDTPRKGDRISEVPAETDECV
TFHAGTQLEDNVLKVTGGRVLCVVGLSDTVRGAQSVAYQTVNQINFDGMQYRHDIGNRAL
ARKPE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcatggttgtcggctcgggcggccgcgaacacgcgctcgcgtggaagcttgcc
caatcgccgcgtattcaactcgtctatgtcgcaccgggtaacggtggcacggcgctcgac
gaacgtctgcgcaacgtgccgatcagcgatccgaacgtgctggccgaattcgccgcacgc
gaaggcatcgcgctgacggtcgtcggcccggaaacgccgctcgccgccggtatcgtcaac
atcttccgcgcccgtggcctgaagatcttcggaccgaccaaggaagctgcacagctcgaa
tcgtcgaaggacttcgccaaagcgttcatgaagcgtcacggcattccgaccgccgattac
gaaacgtttgccgacgcagccgccgctcacgcttacatcgacgccaagggtgcgccgatc
gtcatcaaggccgacggtctggccgccggtaagggcgtggtcgtggcgatgtcgctggaa
gaagcgcacaacgccgtcgacatgatgctcgcggacaacaagctcggcgacgccggtgcg
cgcgtggtgatcgaggaattcctgcaaggcgaagaagccagcttcatcgtgatggtcgac
ggcaaaaacgtgctgccgctggccacgtcgcaggatcacaagcgtctgctggacaacgat
cagggcccgaacacgggcggcatgggtgcttactcgcccgcgccgatcgtcacgccgcag
attcacgcgaaggtgatgcgcgagatcattatgccgacggtgcgcggcatggagaccgac
ggcattcgcttcacgggcttcctctacgccggtctgatgatcgacgccgacggtaacgtc
aagacgctcgaattcaactgccgcatgggcgacccggaaacgcagccgatcatggcgcgt
ctgaagggtgacttctcggtggtggtcgagcacgcgattgcgggtacgctcgacaagatc
gaactcgactgggatcgtcgttatgcgctgggcgtggtgctcgccgctcacggctacccg
gacacaccgcgcaagggcgaccgtatctcggaagtcccggcagagaccgacgaatgcgtg
acgttccacgcaggcacgcagctcgaagacaacgtactcaaggtcacgggcggacgtgtg
ctgtgcgtggtcggcctgtccgacaccgtgcgcggtgcgcaaagcgtcgcataccagacc
gtcaatcagatcaacttcgacggcatgcagtatcgccacgacatcggcaaccgcgcactt
gcgcgcaagccggaataa
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