Pandoraea commovens: NTU39_20710
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Entry
NTU39_20710 CDS
T08365
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NTU39_20710 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_20710 (recC)
Enzymes [BR:
pcom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NTU39_20710 (recC)
DNA repair and recombination proteins [BR:
pcom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NTU39_20710 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UVA78454
LinkDB
All DBs
Position
complement(4610105..4613539)
Genome browser
AA seq
1144 aa
AA seq
DB search
MLHLFFSNRFTTLEAALLRDIAQAPDASSGAGNPFETETIVVPSVAVRRRLELDYADVFG
VCANVRLTYLAQWLWDMAGKLLTVPESSPFAPDRLVWPLYQCLAQPWVEASPRLAGYLAG
ADDVMRFELADRLAHIYDQYLTYRPDWLERWQSGEVISPGASTTWGDVQRADEAWQSALW
RQVLAHLEIRERHPTLRAIDRIEQLTPEAVPVGWPSRVCVFALSSMPPLSMALLKAMSRL
IDVHLYVLNPCESYWFDIVPPSRLSYLTQRDGKAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDRALFQPNPAPTLLAALQNGILSLDDGRHGAPDGVAADGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLITVPDLGRAAPLIDAVFGTATPRIPYLVTGLPPTRTN
PVARAFASILALPQQRVAASSLVELARTEAVAQRYDLGGNVLDAIQNWLHSAGARRGWRG
DALLRLDGAGQTSRDGAVAGAGAGVPPALERHTLGDAMMRLFLGYALPDDAMPVDDWLPV
GGIEGGRAELLGQLARLIDDLDMTAVSLQTERTGLAWRDQLLAMLEQFFSDEPRFADDVA
EVRMAIEQIGTAIADGAPEVRVPVEVVARVLADALDDPTRGGVPSGRVTFAAIPSLRLLP
YRVVCMIGMDDGVLPGRLRADEFDLMRALPQRGDRQRRDDERNLFLDLMLSAQDRFLITY
TGRSVRDNAPLPPSTAVDELLDFTGQLLAPVSQGFDLDEQRKARETLVVLHPLQPFSPAY
FDGREPSLYSYDVANGEAAQQLVGQLASPAPDAAATPFVNEPLPAIVQTHLTLDDLLRFW
RHPGRAWARDRLGLSLGEMLTEVEDEEPFVLDWSGRDALAARLLPRLLRDDAQDSRAQAA
AIERIANVSHELPGGATGAVWRRRELGGLRALATQVREAQAEGTQELLVTLSLKPSLPPS
WTASTDAIWHGDATLCADCLLQGRLAPVSRHGLVMYRYGSMRPSDLLAAWLAHLALCAHL
QQPEHAGLEVAPRTLWYGEDETFALRPVDDAAALLAQWVALYRLGQTRPLPFFVRSAWKL
ASTGKMTDAESAWSGSAFARGDADDPYTKLIWRGVEDPLTSPFDLLANTMFGPMVHHLEI
VEGA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctattcttctccaaccggttcaccacgctcgaagccgccctgttgcgcgac
atcgcacaggcacctgacgcgtcgtcgggggcggggaatccctttgagacggaaaccatc
gtggtgcccagcgtggctgtgcgccgccggctcgaactggactatgcggacgtcttcggc
gtgtgtgcaaacgtccgcctgacgtatctggcgcaatggctctgggacatggcaggcaaa
ctgctcaccgtgccggaaagttcgccgttcgcgcccgaccggctggtctggccgctgtat
cagtgtctcgcgcagccgtgggtggaggcgtcgccgcggctggccggttatctggccgga
gcagacgacgtcatgcggttcgagttggccgaccgacttgcccacatttacgatcaatac
ctgacttaccggccggactggctggaacggtggcaatccggcgaagttatttcgccgggg
gcgtcgacgacctggggcgacgtccagcgtgccgacgaggcttggcaaagcgctttgtgg
cggcaggtgctggcgcatctggagattcgcgagcgccatccgacgctgcgggccatcgac
cggatcgaacagctcacgccggaggcggttccggtcggctggccgtcccgggtttgcgtg
ttcgcgctgtcgtcgatgccgccgctttcgatggcattgctcaaggccatgtcccgcctg
atcgacgtgcatctttatgtcctcaatccctgcgagagctactggttcgacatcgtgccg
ccgtctcggctgtcgtatctgacccaacgtgacggcaaagcccaccgcgaggtggggcac
ccgttgctggcggaatggggacggcagacgcagtcgcacatcgatgcgttatacgcggat
cttgcgccgcaggcggtggaggaccgggcgttgtttcagccgaatccagcgcccacgctg
ctggctgccttgcagaacggcattctttccctggacgatggtcgtcatggcgcacccgac
ggtgtcgcggccgatggctcggtgcaggtgcatgtctgccatagccttgcgcgtcagatc
gaggttctgcacgaccgcctgctggcgtgcttcgacgaaattcccgatctgcgtcccgac
gatgtgctgattaccgtgccggaccttggccgtgcggcaccgctcatcgacgcggtgttc
ggcaccgcaacgccccgcattccttatctggtaaccggcctgccgccgacgcggaccaac
cctgtcgcacgtgccttcgcgtcgattctggcattgccgcagcagcgggtggcggcgtcg
agccttgtcgaactcgcacgcacagaggcagtagcgcagcgttacgacctgggcggcaat
gtgctcgacgccattcagaactggctgcacagtgccggcgcacgccggggctggcgcgga
gacgccttgttgcggcttgacggtgccggacagacgtcacgtgatggcgcggtggccgga
gccggtgctggcgtacctcctgccttggagcgccatacgctgggcgacgccatgatgcgc
ctgttcctcggctatgccttgccggacgacgccatgccagttgacgactggctgcctgtc
ggcggaatcgaaggcggcagggccgagttgctggggcaactggcgcggctgatcgacgat
ctcgatatgacggcggtgtcgctccagaccgagcggaccggcctcgcgtggcgcgatcag
ttgctggcaatgttggaacagttcttctcggatgagccacgttttgccgatgacgtcgcc
gaagtgcgtatggcgatcgaacaaatcggcacggccattgccgacggtgcgcctgaggtg
cgcgtgccggtggaagtggtagcgcgcgtgctggccgacgcgctcgacgatccgacacgc
ggcggggtaccgtcgggacgcgtcacgttcgccgcgattccgagcttgcgtctgttgcca
taccgcgtggtctgcatgatcggcatggacgatggcgtgttgcccgggcgcttgcgcgcc
gacgagttcgatctcatgcgtgcgctgccacaacgtggcgaccgtcagcgccgcgatgac
gagcgcaatctgttcctcgatttgatgctgagtgcgcaggaccgctttctcatcacctat
acggggcgaagcgttcgcgataacgcgccgttgccaccgtccaccgccgtggacgaattg
ctggatttcacgggacagttgctcgcgccggtatcgcagggattcgacctcgacgagcaa
cgcaaagctcgtgagacgcttgttgtcctgcatccgcttcaaccgttctcacccgcgtac
ttcgatggacgtgagccgtcgttgtacagctatgacgttgctaacggcgaggctgctcag
caactggtgggtcagttggcatcccctgcaccggacgcagccgcaacgccgttcgtcaat
gagccattgcccgccatcgtgcaaacgcatcttacgctggacgacctgctgcgcttctgg
cgtcacccggggcgggcgtgggcgcgcgaccggctaggcctgtcgctcggcgaaatgctc
accgaagtcgaagacgaagagccgttcgtactcgactggtcggggcgcgacgcgctcgcc
gcgcggctgctgccgcgactgttgcgcgatgacgctcaggattcgcgagctcaggcggcg
gcgatcgagcgcatcgcgaacgtcagtcatgagctgccaggcggtgcgacgggggcggta
tggcgtcgacgtgaactcggcgggttacgcgcactggctacgcaagtgagagaagcgcag
gcggagggcacacaggaattgctcgtgacgttgtcgctcaagccctcgctcccaccgtcg
tggacggcttcgacggatgcgatctggcacggcgatgcgacgctgtgcgcagactgcttg
ctgcaagggcgtctggccccggtgtcgcgccacggactcgtcatgtatcgctatggcagc
atgcgtccgagcgatctgcttgccgcctggctcgcccacctcgcgctatgtgcacatttg
cagcaaccggaacatgcggggcttgaggtcgcaccacgaacgctctggtatggagaggac
gagacatttgcgctgcgacccgtggacgatgcggcggcactgctcgcgcaatgggtggcg
ttgtatcgccttggccagacccggccgttgccgttctttgtgcggagcgcgtggaaactg
gcgagtaccggaaaaatgacagatgccgaaagcgcgtggtccggctctgcattcgctcgc
ggcgatgccgacgatccctataccaagctgatctggcggggtgtggaagacccgctgacg
tcgccgttcgacttgctggcgaacacgatgttcgggccgatggtgcaccaccttgaaatc
gtggagggcgcatga
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