Pandoraea commovens: NTU39_21025
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Entry
NTU39_21025 CDS
T08365
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcom03009
]
NTU39_21025
Enzymes [BR:
pcom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
NTU39_21025
Ribosome biogenesis [BR:
pcom03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NTU39_21025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Ubie_methyltran
Methyltransf_31
Methyltransf_25
MTS
DUF3701
GCD14
Methyltransf_15
Methyltransf_24
Cons_hypoth95
Fibrillarin
Motif
Other DBs
NCBI-ProteinID:
UVA82222
LinkDB
All DBs
Position
complement(4685909..4687219)
Genome browser
AA seq
436 aa
AA seq
DB search
MRGERLPPALFEHTQRLLGSVLTFTGPADTLVSTYFRANDKLGHRERGVLAETVFAILRR
KLEFGQHAVSGTGSQERRLALLGLAFTRGIASVELVATPEEATWLEHVGQIDPASLAPRV
RTNLPAWLYDRLAARFDATELEALAAALNQPAPLDCRVNLIKANRDDVLAGLRESGFSAE
PTPMAPNGIRLAGKPALQKHPLFMSGAIEVQDEGSQLLCQLVAPRRGEMIVDFCAGAGGK
TLAIGAAMRSTGRLYAFDVSEKRLAKLKPRLARSGLSNVYPVMIDSENDSKIKRLAGKID
RVLVDAPCSGLGTLRRNPDLKWRQSPQSVEELTQKQTSILASAARLVKPGGRLVYATCSV
LTEENSAIAEAFLAAHPDFVLLPANELLAAQKIGLDTGKYLELLPHRNATDGFFAAVFER
RPAAKASVVPSANIDE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgagcgcctgcccccggcgcttttcgaacacacgcagcgcctgctcggcagc
gtgctgacgttcaccggtcctgccgacacgctggtcagcacgtacttccgcgctaacgac
aagctgggccaccgcgagcgcggtgtgctggcggagacggtcttcgccatcctgcgtcgc
aagcttgaattcggtcagcatgccgtgagcggcacgggctcgcaggagcgccgtctggca
ctgctcggactagccttcacgcgcggcatcgcgtcggtagaactcgtcgccacgcccgaa
gaagctacttggctcgaacacgtcggtcagatcgatccggccagcctcgcgccgcgagtg
cgcactaacttgcctgcgtggctgtacgaccgtctggccgcgcgtttcgacgccaccgaa
ctggaagccctcgccgctgcgctgaaccagccggcgccgctggactgtcgtgtgaacctg
atcaaggcgaaccgcgacgacgtgctggccggcctgcgcgagagtggcttctcggccgag
ccgaccccgatggcacctaacggcattcgtctggcgggcaagcctgcgttgcagaagcat
ccgttgttcatgtccggtgccatcgaagtgcaggacgaaggcagtcagttgctgtgccaa
ctggtcgcaccgcgtcgtggtgagatgatcgtcgacttctgcgcgggggcgggcggcaag
acgctcgccatcggcgcggccatgcgctcgaccgggcgtctgtatgcgttcgacgtgtcg
gagaagcgtctggccaagctcaagccgcgtctggcgcgtagcggcctgtcgaacgtctat
ccggtgatgatcgacagcgagaacgacagcaagatcaagcgtctggcgggcaagatcgac
cgcgtgctggtcgacgcaccgtgcagcgggctcggcacgctgcgccgcaatccggatctg
aagtggcgtcagtcgccgcagtcggtcgaagaactcacgcagaagcagacgtccatcctc
gcgagcgccgcgcgcctcgtgaagccgggcggccgcctcgtgtacgcgacgtgcagtgtg
ctgaccgaagagaacagcgcgattgccgaggcgttcctcgctgcgcatccggacttcgtg
ctgctcccggcgaacgaattgctggcggcgcagaaaatcggactcgacacgggcaagtac
ctcgaattgctgccgcaccgcaacgcgaccgacggctttttcgccgccgtgttcgagcgt
cgtccggctgccaaggcttcagtcgtgccgtcagctaatatcgacgaataa
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