Pandoraea commovens: NTU39_21140
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Entry
NTU39_21140 CDS
T08365
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcom03009
]
NTU39_21140
Enzymes [BR:
pcom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
NTU39_21140
Ribosome biogenesis [BR:
pcom03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NTU39_21140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Ig_3
Motif
Other DBs
NCBI-ProteinID:
UVA78532
LinkDB
All DBs
Position
4712175..4712765
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AA seq
196 aa
AA seq
DB search
MTLLALNKPFGTICQFSPHPTRPTLAECIDLPDVYPAGRLDADSEGLLLLTDDGRLQARI
AEPERKLPKTYWAQVEGAYDEAAVARLRGGLDLGDFVTLPCEAREIPEPEHLWARNPPIR
YRASIPTHWLEIKLVEGKNRQVRRMTAAVGKPTLRLVRVAIGPVDVFSLNLSPGQWCELP
QQILTLSGQRSRRPSR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgacacttctcgctctcaataagcctttcggtacgatctgccagttttcgccgcatccg
acgcgcccgacgctcgccgagtgcatcgatctcccagacgtctatccggcgggccgtctc
gacgccgacagcgaaggcttgctactgctcaccgacgacggccgcttgcaggcgcgcatc
gcagagcccgagcgaaagctgcccaagacctattgggcgcaggtcgaaggtgcgtacgac
gaagcggccgttgcccgtcttcgtggcggcctcgatctgggcgacttcgtcacgttgccg
tgcgaggcacgcgaaatccccgagcccgagcatctctgggcacgcaatccgccgatccgc
taccgcgccagcattccgacgcactggctcgaaatcaaactcgtcgaaggcaagaatcgc
caggtcagacgcatgacggcggccgtcggcaaaccgacacttcggctcgtgcgcgtggcc
atcggcccggtcgacgtcttttcgttaaatctctcacccggtcagtggtgcgaactgccg
caacaaatacttacactttccggtcaacgtagccgtcgtccatctcgttga
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