KEGG   Pandoraea commovens: NTU39_22285
Entry
NTU39_22285       CDS       T08365                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pcom  Pandoraea commovens
Pathway
pcom03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pcom00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    NTU39_22285 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcom03019]
    NTU39_22285 (rnc)
   03009 Ribosome biogenesis [BR:pcom03009]
    NTU39_22285 (rnc)
   03036 Chromosome and associated proteins [BR:pcom03036]
    NTU39_22285 (rnc)
Enzymes [BR:pcom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     NTU39_22285 (rnc)
Messenger RNA biogenesis [BR:pcom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NTU39_22285 (rnc)
Ribosome biogenesis [BR:pcom03009]
 Eukaryotic type
  90S particles
   RNase
    NTU39_22285 (rnc)
 Prokaryotic type
  rRNA processing factors
   NTU39_22285 (rnc)
Chromosome and associated proteins [BR:pcom03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     NTU39_22285 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: UVA78741
UniProt: A0ABY5QD62
LinkDB
Position
complement(4952303..4953340)
AA seq 345 aa
MSQSLNQLEERLQYRFHDAELLCQALTHRSHSAANNERLEFLGDSILNCSVAAILFRRYG
KLDEGDLSRVRANLVKQQSLYEIAQTLGVSDFLRLGEGELKSGGFRRPSILADTLEALFG
AMYLDGGFEKAYAVIERLYTPVLEHVDPKTLGKDAKTLLQEYLQGHKIALPQYTVIATHG
AAHNQQFEVECTVPKLDIKVGGSGASRRAAEQAAAKKALEEVQKMPALAKPKAEKSAKAA
KKRAAKAAASEAKKAVQVGQAGQLTVASQAESKDVKESREPKDARDATAGASTAPAMTAS
SHNAPRNAAASPEKSAEKSAEKPAEKSAEKPTDKADAAKQPPAAA
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtctcaatcactgaatcaactggaagaacgtctccagtatcgtttccacgatgcggaa
ttgctttgccaagcactgacgcaccgtagccacagtgccgccaacaatgagcggctggag
tttctcggcgattccattctgaactgttcggtcgcagcgattctgttccgtcgctacggc
aagctcgacgaaggcgacctctcacgtgtgcgcgccaatctcgtgaagcaacaatcgttg
tacgagatcgcgcagacgcttggcgtttccgattttcttcgcctgggcgaaggcgagctc
aagagcggtggtttccgtcgtccctcgattctggccgatactctcgaagcgctgttcggg
gcgatgtacctcgatggcggtttcgagaaggcctacgcggtgatcgagcgtctgtacacg
cccgtgctcgaacatgtcgatccgaagacactcggcaaagacgccaagacgctgcttcag
gaatacctgcaaggccacaagatcgcgctgccgcagtacacggtgatcgctacccacggg
gcggcgcacaaccagcagttcgaggtcgagtgcaccgtgccaaagctcgacatcaaggtg
ggcggttcgggcgccagccgtcgcgcggccgagcaggcagcggccaagaaagcgctggag
gaagtgcagaaaatgcccgcgctggcgaagccgaaggccgagaagagcgcgaaggcggcg
aagaagcgtgctgccaaggcggcggcctcggaagcgaagaaggccgtacaggtagggcaa
gccgggcaactgacggtggcgtcgcaggctgagtcgaaggacgtgaaggagtcgcgggag
ccgaaggatgcgcgcgatgccacggccggcgcgagcacggcgccagccatgaccgcgtcg
agccacaatgcgcctcgcaacgcggccgcatcgcccgagaagtccgctgaaaagtccgct
gagaagccggctgaaaagtccgccgaaaagccgaccgacaaggccgacgccgccaagcaa
cctccggcagctgcctga

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