Pandoraea commovens: NTU39_22285
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Entry
NTU39_22285 CDS
T08365
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NTU39_22285 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcom03019
]
NTU39_22285 (rnc)
03009 Ribosome biogenesis [BR:
pcom03009
]
NTU39_22285 (rnc)
03036 Chromosome and associated proteins [BR:
pcom03036
]
NTU39_22285 (rnc)
Enzymes [BR:
pcom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NTU39_22285 (rnc)
Messenger RNA biogenesis [BR:
pcom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NTU39_22285 (rnc)
Ribosome biogenesis [BR:
pcom03009
]
Eukaryotic type
90S particles
RNase
NTU39_22285 (rnc)
Prokaryotic type
rRNA processing factors
NTU39_22285 (rnc)
Chromosome and associated proteins [BR:
pcom03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NTU39_22285 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UVA78741
UniProt:
A0ABY5QD62
LinkDB
All DBs
Position
complement(4952303..4953340)
Genome browser
AA seq
345 aa
AA seq
DB search
MSQSLNQLEERLQYRFHDAELLCQALTHRSHSAANNERLEFLGDSILNCSVAAILFRRYG
KLDEGDLSRVRANLVKQQSLYEIAQTLGVSDFLRLGEGELKSGGFRRPSILADTLEALFG
AMYLDGGFEKAYAVIERLYTPVLEHVDPKTLGKDAKTLLQEYLQGHKIALPQYTVIATHG
AAHNQQFEVECTVPKLDIKVGGSGASRRAAEQAAAKKALEEVQKMPALAKPKAEKSAKAA
KKRAAKAAASEAKKAVQVGQAGQLTVASQAESKDVKESREPKDARDATAGASTAPAMTAS
SHNAPRNAAASPEKSAEKSAEKPAEKSAEKPTDKADAAKQPPAAA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcactgaatcaactggaagaacgtctccagtatcgtttccacgatgcggaa
ttgctttgccaagcactgacgcaccgtagccacagtgccgccaacaatgagcggctggag
tttctcggcgattccattctgaactgttcggtcgcagcgattctgttccgtcgctacggc
aagctcgacgaaggcgacctctcacgtgtgcgcgccaatctcgtgaagcaacaatcgttg
tacgagatcgcgcagacgcttggcgtttccgattttcttcgcctgggcgaaggcgagctc
aagagcggtggtttccgtcgtccctcgattctggccgatactctcgaagcgctgttcggg
gcgatgtacctcgatggcggtttcgagaaggcctacgcggtgatcgagcgtctgtacacg
cccgtgctcgaacatgtcgatccgaagacactcggcaaagacgccaagacgctgcttcag
gaatacctgcaaggccacaagatcgcgctgccgcagtacacggtgatcgctacccacggg
gcggcgcacaaccagcagttcgaggtcgagtgcaccgtgccaaagctcgacatcaaggtg
ggcggttcgggcgccagccgtcgcgcggccgagcaggcagcggccaagaaagcgctggag
gaagtgcagaaaatgcccgcgctggcgaagccgaaggccgagaagagcgcgaaggcggcg
aagaagcgtgctgccaaggcggcggcctcggaagcgaagaaggccgtacaggtagggcaa
gccgggcaactgacggtggcgtcgcaggctgagtcgaaggacgtgaaggagtcgcgggag
ccgaaggatgcgcgcgatgccacggccggcgcgagcacggcgccagccatgaccgcgtcg
agccacaatgcgcctcgcaacgcggccgcatcgcccgagaagtccgctgaaaagtccgct
gagaagccggctgaaaagtccgccgaaaagccgaccgacaaggccgacgccgccaagcaa
cctccggcagctgcctga
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