Pandoraea commovens: NTU39_22855
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Entry
NTU39_22855 CDS
T08365
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
pcom
Pandoraea commovens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Pertactin
PATR
Motif
Other DBs
NCBI-ProteinID:
UVA78843
LinkDB
All DBs
Position
5076048..5079068
Genome browser
AA seq
1006 aa
AA seq
DB search
MKPIAILAGVIALFAEQHALAANFQIINGQTITAGQTLSSGQTGTINNGGTLQVSGGTVG
ITTTGNATIVNNGTINMTGTGRAIRDNTGVSLTVTNGVGASMTTFDADVIQMNKSNGSIV
FNNYGTLTSTNNSGSGNQAIDFNAITTGTNVLNNFAGGVIQANEADAVRPGVNGVVNNAG
IIRSTVNPGSTSSSDGVDAQANSGITVNNTGAGLIQGARHGITGGVDTTTDGTFTLNVNN
SAGATIQGMNGSGINIDGFNAKEVVTIVNAGTIIGNGVTGDGDGVDVDGIVNITNSGTIR
GARANNDVSEGVTVGGGTIVNSGTIVGENTPGGIGRGITLAGVDKDPVTKAPIAPQGIYT
NTTIVNSGLIRGQSDSAIAVTGGRNAFTVTVINQASGVLEGGGATAAVVNTGANDATVTN
YGTITADQSGKAVDLGSGNSNLQILGGAAVMNGDVSGGTGTSTLTITPGAGNAFSYNGAI
SNFSAVSLGAGTIALNGASTYAGATSIASGATVLVGDAAHRSATLGSGMTSVASGATLGG
YGGVLGSVTNAGIIAVGSASLGATPGALGTFTIAGDYVGNNGTALFGATVSPDGSTASDK
LVINGNASGTTLLKLTVTGTGVPTSGAGIQLVQVNGTASDGAFKLAAPIQAGAYQYLLRK
VGPVGGDPSWYLSTSYASGQTAYRAAAVGYAMTPQLNADFGYTMLGRLQERMGSVRGVSV
PGEDASNGVWGRLYGKTMDTTLSGRFGADERMFAAQFGRDWRLNTDASGMGGSALVGLTA
TFGTASASFSDSARTQDPTLSAATGTVSMQAQSVGAYWTRILPQGAFIDVTTQFSHYRNK
YSDVAGLGATQNGFGAALSGEVGHRFSILGSGFTVEPQVQLAYQYLHLNGFSDSVSSVSG
NTTNALRGRVGVKFNTPDLGNAVGVGSASPYLSVDVVHDFLSPGATNVGGATFDSSLAKT
WYELGAGVEATLGRTSSMYAGVKYARNMGGDYRRNVYGQVGYRYRW
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccatcgccattctggcaggcgtcatcgcgcttttcgccgagcagcacgccctc
gccgctaatttccaaatcatcaacgggcagacgatcaccgcagggcagacgttgtcgagc
ggccagaccggcacgatcaacaacggcggcacgttgcaggtcagcggcggcaccgtaggc
attacgaccaccggcaacgccaccatcgtcaacaacggcacaatcaacatgacgggcacc
ggccgggccattcgcgacaacacgggtgtgtcgctcacggtcacgaacggtgtcggcgcg
agcatgacgacgttcgatgccgacgtgatccagatgaacaagtcgaacggcagcatcgtc
ttcaacaactacggcacgctgacgtcgaccaacaattccggctccggcaatcaggccatc
gacttcaacgccatcacgaccggcaccaacgttctcaacaactttgcgggcggtgtcatt
caggcgaacgaagccgatgcggtgcgccccggcgtgaatggggtggtcaacaacgcgggc
atcatccgctcgacggtgaaccccggcagcacgagcagcagcgacggcgtcgatgcgcag
gccaacagcggcatcaccgtcaacaatacgggcgccggtctgattcagggggcgcgccac
ggcattacgggcggcgtcgacacgacgaccgacggcaccttcacgctgaacgtcaacaac
agcgccggtgcgacgattcagggcatgaacggctccggcatcaacatcgatgggttcaac
gccaaggaagtcgtcaccatcgtcaacgcgggcacgatcatcggtaacggcgtgacgggc
gatggcgacggtgtggatgtcgacggtatcgtcaacatcaccaactcgggcacgattcgc
ggcgcgcgcgccaacaacgacgtcagcgaaggcgtcactgtgggcggtggcaccatcgtc
aacagcggcaccatcgtcggcgagaacacgcctggcggcatcggtcgcggcatcacgctc
gcgggtgtcgacaaagaccccgtcaccaaagcgcccatcgcgccgcagggcatctacacg
aacacgaccatcgtcaacagcggcctcattcgtggccagagcgactcggcgattgcagtg
acgggcgggcgcaacgccttcaccgtgaccgtcatcaatcaggccagcggtgtgctcgaa
ggcggcggtgcgacggcggcagtcgtgaataccggcgcaaacgatgccaccgtgaccaac
tacggcacgatcacagccgaccaaagcggcaaggcggtggatctgggcagcggcaacagc
aatctccagattctgggcggcgcagcggtgatgaatggcgacgtgtccggcggcaccggc
accagcacactgacgatcacaccgggtgcgggcaacgcgttcagctacaacggcgcgatt
tccaacttctcggcggtctcgctcggcgcgggcacgatcgcactgaacggtgcgagcact
tacgcgggcgcaacgtcgattgccagcggtgcgacggtcctcgtcggcgacgccgcgcat
cgcagcgcaacgctgggcagcggcatgacgagcgtcgcctccggtgcgacgctcggcggt
tacggcggcgtgctcggcagcgtgacgaacgcgggcatcatcgcggtgggtagcgcttcg
ctgggtgctacgccgggggcgctcggcacgttcaccatcgcgggcgattacgtcggcaac
aacggcacggcactgttcggtgcgacggtctcgccggatggctcgaccgcatcggacaag
ctcgtcatcaacgggaacgcaagcggcacgacgctgctcaagctcaccgtcacggggacg
ggtgtgcccacgtcgggagcgggcattcaactggtgcaggtcaacggaacggcctccgat
ggggccttcaagctggcggcaccgattcaggcgggcgcgtatcagtacctgcttcgcaag
gtcggcccggtgggcggcgatccgagctggtacttgtcgacgtcgtacgcgtcgggccag
acggcctatcgcgccgcagccgtcggctacgcgatgacgccgcaactgaacgccgacttc
ggttacacgatgctgggccgcttgcaggaacgcatgggcagtgtgcgtggcgtgagcgtg
ccgggtgaggatgcatcgaacggtgtgtggggacgtttgtacggcaagacgatggacacc
acgctgtcgggacgcttcggtgcggacgaacgcatgttcgcggcgcagttcggccgcgac
tggcgtctgaatacggatgcctcaggcatgggcggcagcgcgctcgtggggctgacggcg
acgttcgggacggcctcggcgtcgttctccgacagcgcgcgcacgcaggacccgacgctc
tccgccgcgaccggcaccgtctcgatgcaggcgcaatcggtcggggcatactggacgcgc
attctgccgcaaggcgccttcatcgacgtcacgacgcagttctcccactatcgcaacaag
tacagcgacgtcgctggtttaggcgcgacgcagaacggcttcggtgcggcactgtcgggc
gaggtcggccatcgcttctcgattctgggatcgggcttcaccgtcgagccgcaagtgcag
ctggcgtatcagtacctgcatctgaacggcttcagcgacagcgtgtcgtctgtgtcgggc
aatacgacgaatgccctgcgcgggcgcgtgggcgtgaaattcaatacgccggatctgggc
aatgcggtgggtgtcggttcggcgtcgccgtatctgagcgtcgacgtggtccacgacttc
ctctcgccgggtgcgaccaacgtgggcggtgcgacgttcgacagcagcctggcgaagacg
tggtacgaactcggcgcaggcgtcgaagcgacgctgggccgcacgtcttcgatgtatgcc
ggtgtgaagtacgcccgcaacatgggcggcgactaccgtcgtaacgtctacgggcaggtg
gggtaccggtatcgctggtga
DBGET
integrated database retrieval system
