Pandoraea commovens: NTU39_23275
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Entry
NTU39_23275 CDS
T08365
Name
(GenBank) mechanosensitive ion channel family protein
KO
K16053
miniconductance mechanosensitive channel
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_23275
Transporters [BR:
pcom02000
]
Other transporters
Pores ion channels [TC:
1
]
NTU39_23275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
UVA78916
UniProt:
A0A5E4Z6A1
LinkDB
All DBs
Position
complement(5167372..5168607)
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AA seq
411 aa
AA seq
DB search
MTWEAVMAWFENAPWARMAGSLAMLIAAAALVQAVAQFVIVRIVRIVVQRTANRWDDALL
AHRVFHRAARILPYLVIQFGIEWVPDLPAKAVIVISNVALATTLLYATLAIVGILDAAQT
VYAMSEHARTRSIKGYVQLGKIALYVVASIGIVATIVDRSPWLLLSGLGAMSAVLLLVFK
DTIMSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDIALHTVKVQNWDKTITTIPTWRL
ISESFRNWRGMQQSGGRRIKRTLCIDAGSVGFLNADEIAHLSQVHLLGGYLSEKQRSIAD
ANAALGVAAGVLANTRRLTNIGTFRAYALAYLKAHPNIHQGMTCMVRSLQPSATGIPIEL
YCFTNTIVWAEYERVQGDVFDHLLAILPEFGLRMYQNPAGADLMRWGQRDA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgggaagcagtgatggcgtggttcgaaaatgcgccgtgggcgcgcatggccgga
tcgttggcgatgctgattgcagcggccgcgctggtgcaggcggtggcgcagttcgtgatc
gtgcggatcgtacgcatcgtggtgcagagaacggcgaatcgttgggacgatgcgttgctc
gcgcatcgcgtcttccaccgggcggcgcgcattctgccgtacctcgtcattcagttcggc
atcgagtgggtgccggatctaccggcgaaggcggtgatcgtcatcagcaatgtggccctc
gccacgacgctgctctacgcaacgctcgctatcgtgggcattctcgacgccgcacagacc
gtctacgcgatgtcggaacacgcacgcacgcgctcgatcaaggggtacgtccagctcggc
aagatcgcgctttacgtggtggcgtcgattggtatcgtcgcaacgatcgtcgaccgttcg
ccgtggctactgctttccggcctgggcgcgatgtcggcagtgctgttgctggtattcaag
gacacgatcatgtcgttcgtcgccagcgtgcaactcacgtcgaacgacatgctgcgcgtg
ggcgactggatcgagatgccgcaggtcggggccgatggcgacgtggtggatatcgcgttg
catacggtgaaggtgcagaactgggacaagacgatcacgacgattccgacgtggcgtctg
atttcggagagcttccgtaactggcgcggcatgcagcagtcgggcgggcgccgtatcaag
cgcacgctgtgtatcgacgctggcagcgtcggattcctgaacgccgacgagatcgcgcat
ttatcccaggtgcatctgctgggcggctatctgtcggaaaaacagcgttcgatagcggat
gccaatgcggcgctcggtgtcgcggcgggcgtgctggcgaacacacggcgtctgacgaac
atcggcacgtttcgcgcgtatgcgctggcgtatttgaaggcgcatccgaacatccaccag
ggcatgacatgcatggtgcgctcgctccagccgtcggcaacgggcattccgatcgaactg
tactgcttcacgaacacgatcgtgtgggcggagtacgagcgtgtgcagggcgacgtcttc
gaccatctgctggccatcctccccgagttcggcctgcgcatgtaccagaaccccgccggt
gcagatctgatgcgctgggggcagcgcgacgcctaa
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