Pandoraea commovens: NTU39_23345
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Entry
NTU39_23345 CDS
T08365
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcom03016
]
NTU39_23345 (miaB)
Enzymes [BR:
pcom01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NTU39_23345 (miaB)
Transfer RNA biogenesis [BR:
pcom03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NTU39_23345 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
UVA78930
LinkDB
All DBs
Position
5183884..5185227
Genome browser
AA seq
447 aa
AA seq
DB search
MAKKIYIKTFGCQMNEYDSDKMADVLGAAEGLEKTDTPEDADVILFNTCSVREKAQEKVF
SDLGRMRALKEIKPDLVIGVGGCVASQEGAAIVQRAPYVDVVFGPQTLHRLPQMLEARRS
TGRSQVDISFPEIEKFDHLPPAKVEGATAFVSIMEGCSKYCSYCVVPYTRGDEVSRPFED
VLTEIAGLAEQGVREITLLGQNVNAYRGLMADGEIADFALLIEYVAEVPGIERIRYTTSH
PKEFTQRLIDTYAKVPKLVSHLHLPVQHGADRVLSAMKRGYTVLEYKSIIRRLRQVRPEM
SMSSDFIVGFPGETEEDFDKLMAMIHEIGYDTSFSFIYSPRPGTPAANLQDDTPREVKLR
RLQHLQAVIEENAARISQSMVGSRQRILVEGVSRKDPNELQGRTENNRVVNFPAPEAQRA
ALIGQMTDVVITFAYPHSLRGELVTTH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagatttacatcaagacgttcggctgtcagatgaacgagtacgactccgac
aagatggcggacgtgctgggcgcagccgaaggtctcgagaagaccgacacccccgaagac
gccgacgtcatcctctttaacacctgctccgtgcgcgaaaaggcacaggaaaaagtgttc
tcggatctgggccgcatgcgcgccctcaaggaaatcaagccggatctggtgatcggtgtc
ggcggttgcgtcgccagtcaggaaggcgcggccatcgtgcaacgcgccccttacgtggac
gtggtgttcggcccgcaaacgctgcaccgcctgccccagatgctcgaagcgcgccgctcg
accggccgttcgcaagtcgacatctccttccccgaaatcgagaaattcgatcacctgccg
cccgccaaggtcgagggtgctacggcgttcgtctcgatcatggaaggctgctcgaagtat
tgcagctactgcgtggtgccttacacgcgcggcgacgaagtctcgcgtccgtttgaagac
gtgctcaccgaaatcgccgggctggccgaacaaggcgtgcgtgaaatcacgctgctgggc
cagaacgtgaacgcctatcgcggtctgatggccgacggcgagatcgccgacttcgcgctg
ctcatcgagtatgtggcggaagtgccgggcatcgaacgcattcgttacacgacgagccat
ccgaaggaattcacgcagcgtctgatcgacacctacgccaaagtgcccaagctcgtgagc
cacctgcacctgccggtgcagcacggcgccgaccgcgtgttgtcggccatgaagcgcggc
tacacggtgctggagtacaagtcgatcatccgtcgcctgcgccaggtgcgcccggaaatg
tcgatgtcgtcggacttcatcgtcggcttccccggcgagacggaagaggatttcgacaag
ctcatggcgatgattcacgagatcggctacgacaccagcttctcgttcatctacagcccg
cgtcccggcacgccggccgcgaacttgcaggacgacacgccgcgcgaagtgaagctgcgc
cgtctgcaacatttgcaggccgtgatcgaagagaacgccgcacgcatcagccagagcatg
gtcggctcgcgtcagcgtattcttgtcgaaggcgtgtcgcgcaaagacccgaacgagctg
caaggccgcaccgagaacaaccgcgtggtcaacttcccggcccccgaggcacagcgcgca
gcgctgatcgggcagatgaccgacgttgtgatcaccttcgcgtatccgcactcgctgcgc
ggcgaactggtcaccacgcactga
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