Pandoraea commovens: NTU39_23640
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Entry
NTU39_23640 CDS
T08365
Symbol
lpxO
Name
(GenBank) lipid A hydroxylase LpxO
KO
K12979
beta-hydroxylase [EC:1.14.11.-]
Organism
pcom
Pandoraea commovens
Pathway
pcom00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NTU39_23640 (lpxO)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcom01005
]
NTU39_23640 (lpxO)
Lipopolysaccharide biosynthesis proteins [BR:
pcom01005
]
Lipid A
NTU39_23640 (lpxO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_Arg_Hydrox
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
UVA78979
LinkDB
All DBs
Position
complement(5249539..5250435)
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AA seq
298 aa
AA seq
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MKWIVLAIIAACAVYVHFRGKVRHKFFRQLSDHSTFLSPLNVFMYTFSRVPTTPYLKSDN
FPELEPLRQNWEAIRAEAMSLLDASRIKASDKYNDVGFNSFFKSGWKRFYLKWYDESHPS
AKALCPVTTDLVRKIPTIKAAMFAELPHGSRLVRHRDPYAGSLRYHLGLVTPNDDRCYID
VDGQRYSWRDGEGVMFDETYIHYAENQSGQNRIILFCDVERPMKYRWTQAINRWFGRHLV
GAAASPNDAGDRTGGLNKVFKYIYSIRIVGKRLKAWNRSVYYAVKWALFGGILLWILW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggattgttctggcgatcattgctgcttgtgctgtgtatgtgcatttccgcggt
aaggttcgccataaatttttccgccaactgtccgaccattcgacgttcctgtcaccgctg
aacgtctttatgtacaccttttcgcgtgtacctacgacgccttatctgaagtccgacaat
ttccctgaactggagccattgcgtcagaactgggaagcgattcgtgccgaagcgatgtcg
ttactcgacgcgagccgtatcaaagcgtccgacaagtacaacgatgtcggcttcaattcg
ttcttcaaaagcggttggaagcggttctatctgaagtggtatgacgaatcgcatccgtcc
gccaaagcgctgtgtccggtcacaaccgacctcgtgcgcaagattccgacgatcaaggcg
gcgatgtttgcagaattgccgcatggcagccgattggtgcgtcaccgcgatccgtacgcc
ggttcgctgcgctatcacctcgggctggtcacgccgaacgacgaccgttgttacatcgat
gtcgacggtcaacgttatagttggcgcgatggtgaaggcgtgatgttcgatgagacgtat
attcactacgccgagaaccagagcggccagaatcgcatcattctgttttgcgatgtcgag
cgtccgatgaagtaccgctggacgcaggccatcaaccgttggttcggccgtcatctggtg
ggcgcagcagcgtcgccgaacgacgcgggcgaccgtaccggtggcttgaacaaggtgttc
aagtatatttactcgattcgcatcgtcggcaaacgtctgaaggcgtggaaccgtagcgtg
tactatgcggtgaaatgggcgttgttcggaggcatcctgctatggattctctggtga
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