Pandoraea commovens: NTU39_23760
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Entry
NTU39_23760 CDS
T08365
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pcom
Pandoraea commovens
Pathway
pcom02024
Quorum sensing
pcom03060
Protein export
pcom03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NTU39_23760 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NTU39_23760 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTU39_23760 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcom02044
]
NTU39_23760 (ffh)
Enzymes [BR:
pcom01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NTU39_23760 (ffh)
Secretion system [BR:
pcom02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NTU39_23760 (ffh)
Eukaryotic Sec-SRP protein
NTU39_23760 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_16
AAA_31
AAA_30
YqeC
AAA_33
T2SSE
APS_kinase
ABC_tran
ATP_bind_1
AAA_14
ArsA_ATPase
AAA_18
Thymidylate_kin
nSTAND3
KTI12
MobB
Rad17
TsaE
AAA_19
Diphthamide_syn
cobW
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
UVA79002
LinkDB
All DBs
Position
5275044..5276408
Genome browser
AA seq
454 aa
AA seq
DB search
MLDNLTTRLAKVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVRDFIAKVKEKAL
GEEVISSLSPGQALVGVVQRELTALMGGDYEGRAAELNLATTPPAIILMAGLQGAGKTTT
VGKLAKLLRAQKKKVLTVSTDVYRPAAIAQLETVTKQVDADFFPSQPDQKPVDIARAAVD
WARRHHHEVLLVDTAGRLGIDEAMMQEISALHAELKPIETLFVVDAMLGQDAVNTARAFN
DALPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVGEKLDGLEVFYPDRMANRILGM
GDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFKAQIGQMKKMGGLSSLMDKLPAQ
FQAAASQTNMDQAEKQVRRMEGIINSMTPAERAKPELIKASRKRRIAAGAGVQVQEVNRM
LNQYDQMRTMMKKLKGGGMMKMMRSMKGMMPGMR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaatctcactacgcgccttgccaaagtcgtcaagaccctgcgcggcgaagcc
cggctgaccgaggccaacacgcaggaaatgctgcgcgaagtgcgcctcgccctgctcgag
gccgacgtcgccctgccggtggtgcgcgatttcatcgccaaggtgaaggaaaaggccctc
ggtgaggaagtcatttccagcctgtcgcccggccaggcactcgtcggcgtggtgcagcgc
gaactgaccgcgctgatgggcggcgactacgaaggccgtgccgccgaactcaatctcgcc
actaccccgcctgccatcatcctgatggccggtttgcagggtgcaggtaagacgacgacc
gtcggtaagctcgccaagctgctgcgcgcccagaagaagaaagtcctcacggtttccacc
gacgtctaccgccccgccgctatcgcccagttggagacggtcacgaagcaggtcgacgcc
gacttcttcccgtcgcaacccgaccagaagccggtcgatatcgcccgcgccgccgtggac
tgggcacgtcgccatcaccatgaagtgctgctcgtcgatacggccggccgtctgggtatt
gacgaagcgatgatgcaggaaattagtgccctgcacgctgagctgaaaccgatcgaaacg
ctgttcgtcgtcgacgccatgctcggccaggacgccgtgaacaccgcccgcgccttcaac
gacgcgctgccgctcaccggcgtggtgctcaccaagctcgacggcgattcgcgcggcggt
gcggcgctgtcggtgcgtcacgtcacgggcaagccgatcaagttcgtcggtgtcggcgaa
aagctcgacggcctcgaagtcttctacccggatcgcatggcgaaccggattctcggcatg
ggcgacattctcgcgctcgtcgaggaagcccaacgcggcgttgacgttcaggccgcgcaa
aagctcgccgacaaggtcaagaagggtggcgacttcgatctgaacgacttcaaggcgcag
atcggccagatgaagaagatgggcggcctgtcgtcgctcatggacaagctgccggcccaa
ttccaggccgccgccagccagaccaatatggatcaggccgagaagcaggtgcgccgcatg
gaaggcatcatcaactcgatgacgcccgccgagcgcgccaagccggaactgatcaaggcg
agccgcaagcgccgtatcgccgccggtgcgggcgttcaggtgcaggaagtcaaccgcatg
ctgaatcagtacgatcagatgcgcacgatgatgaagaaactcaaaggcggtggcatgatg
aagatgatgcgcagcatgaagggcatgatgcccggcatgcgctga
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