Pandoraea commovens: NTU39_25355
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Entry
NTU39_25355 CDS
T08365
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_25355
Transporters [BR:
pcom02000
]
Other transporters
Pores ion channels [TC:
1
]
NTU39_25355
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
UVA79276
UniProt:
A0ABY5QEP4
LinkDB
All DBs
Position
complement(5625989..5628514)
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AA seq
841 aa
AA seq
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MAVALPAFPELSRALPSTATGLRRRRVCAGVALTFASFASTFGAGVAHAQTSDQAPATAK
VAAAARAYDIPAGALDAVLTRFGREAGILLTYTPALTAGRQSPGVQGRFDVPGAFGQMLA
GTGLTAAPQGAGYTLVPQAAPAAATLAAGGGSGDVALPTTHVQGQAWSDAYRLPVDANVT
RSDTPILDIPQAINVVPRQVLADQRARTLDDALINVSGIVQGNTLASTQDTLLKRGFGGN
RDGSIMHNGMPLVQGRGLNANADSVEVLKGPTSLLYGIMDPGGVINVVSKRPLLKPYTAV
SVAGTTYGHGKNGVEETLDTTGPIGDSGLAYRLVVDQNNQQYWRVFGSQRETLVAPTLAY
YGRDTQVVASYEYRNFLTPFDRGTALDPKTNRPLAISARERLDDVHNEMAGQSHLAQITV
DHQFNPDWKAHFGYSYNTETYDAGQLRITGVNSTTGIVSRSNDGTLGSDSTDSFGTAYLD
GKVMLAGMRHDLQFGGDWEYRRIYRRDLLRQAAKCTFSYLNPVYGCEVIPSTVSAADSDQ
TDTLHDASLFFQDAIHLTDHWIVVGGVRLLTYSQIAGKGRPFKANTNISDSKWLPRAGVV
YKAREYLSFYGSYSESLKPTSTIAPLSTGVVIDSNVAPEHAKSYEVGAKLDMPNGLSGNL
AVFNIDKRNVLVSQAVPGSSTLDWRTSGAARSRGVELDVSGRIGQRWNVIASYAFIDAKI
TDDPMYTGNTLVNAARHTASLAGVYDWGPVLGDGSGNLRLGAVGRYIGARPGDSANSFTL
PAYFVADVFATYDTKIGRHPVHYQLNVKNVFNKTYYPSSVSQTVVAIGDARSATLSATFE
F
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgctttacccgcattccccgaactatcgcgtgccctgccatccactgctacc
gggttgcgtcgacgccgcgtctgcgctggcgtcgcgctgacgtttgcgtcgttcgcttcg
acgtttggtgcgggcgtcgctcatgcgcagacgtccgatcaggcacccgcgacggccaaa
gtcgctgccgctgcacgggcttatgacatcccggcgggcgcgctcgacgcggtgctcacg
cgcttcggacgcgaagcgggcatcttgttgacgtacacgcctgccctgacggcggggcgt
cagagtcccggcgtgcaaggccgcttcgatgtgccgggggcgttcggtcagatgctcgcg
ggcaccggactgacggcggcgccgcaaggggccggttacacgctcgtgccacaggcggcc
ccggcggctgcgacgttggccgccggtggtggttcgggagacgttgcactgccgacgacg
cacgtgcaaggtcaggcgtggtccgatgcctaccgtctgccggtggacgcgaacgtcaca
cgctcggacaccccgatcctcgacatcccccaggccatcaacgtggtgccgcgtcaggtg
ctcgccgaccagcgtgcccgcacgctcgacgacgcgctgatcaatgtcagcggcatcgtg
cagggcaatacgctggcaagtacgcaggacacgctgctcaagcgcggcttcggcggcaat
cgcgacggctcaatcatgcacaacggtatgccgctcgtgcagggccgcggactgaacgcg
aacgcggattcggtcgaagtgctcaaggggccgacgtcgctgctctacgggatcatggac
cccggtggcgtgatcaacgtggtgagcaagcgtcccctgctcaagccttacaccgcagtg
agcgtggcgggcacgacctatgggcacggtaagaacggcgtcgaggagacgctcgatacg
accggaccgatcggtgattcgggactggcttaccggctggtcgtcgatcagaacaatcag
cagtactggcgcgtcttcggttcgcagcgtgagacgctcgtcgccccgacgctcgcctat
tacggacgcgatacgcaggtcgtcgcctcctacgagtaccgtaactttctgaccccgttc
gaccggggcaccgcgctggacccgaagacgaaccggccgctggcgatttcggcacgggag
cgtctggatgacgtccacaacgaaatggccgggcagtcccatctggcgcagatcaccgtc
gaccatcagttcaatccggactggaaggcgcacttcggctacagctacaacaccgagacg
tacgacgcggggcagttgcgcattaccggcgtgaattccacgacggggatcgtctcgcgc
agtaatgacggtacgctcggctcggacagcaccgacagcttcggtacggcgtatctcgac
ggcaaggtgatgctcgcaggcatgcgtcacgacctgcaattcggcggagactgggagtat
cgacgtatttatcggcgcgatctgctgcgtcaggccgcgaagtgcacgttctcttatctg
aatccggtgtacggctgcgaggtgatcccgagtacggtgtctgccgccgatagcgatcag
accgatacgctgcacgacgcttcgctgttcttccaggacgccatccatctgaccgatcac
tggattgtcgtcggtggcgtgcggttgctgacgtatagccagatcgcaggcaaggggcgg
ccgttcaaggcaaacacgaacatcagcgactcgaagtggctgccgcgcgcgggcgttgtc
tataaggctcgggagtatctgtcgttctacggtagctattccgagtcgctcaagccgacg
tccaccattgcgccgttgtcgacgggcgtggtcatcgactcgaacgtcgcacccgagcac
gcgaagtcgtacgaggtcggggcgaagctcgacatgccgaacgggctgagcggcaacctt
gcggtgttcaacatcgacaagcgcaacgtgctcgtgtcgcaggcggtgcccgggagcagt
acgctggactggcgcacctccggggcggcgcgctcgcggggcgtcgagctggatgtgtcg
ggacgcatcgggcagcgctggaacgtgatcgcgagctacgcattcatcgatgcgaagatc
accgacgatccgatgtacaccggcaacacgctggtcaatgcggcacggcatacggcgtcg
ctggcaggggtgtatgactgggggccggtgctgggcgatgggagcggcaacttgcgcctc
ggagcggtggggcgatacatcggggcgcgcccgggtgattcggcgaacagctttacgctg
cccgcgtacttcgtcgctgatgtgttcgcgacgtacgacacgaagatcggacggcatccc
gttcactatcagctcaacgtgaagaacgtgttcaacaagacctactacccgtcgagtgtc
agccagacggtggtggccatcggcgacgcgcgctccgcaacgttgtcggcgacgttcgag
ttctga
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