Pandoraea commovens: NTU39_25590
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Entry
NTU39_25590 CDS
T08365
Symbol
sctE
Name
(GenBank) type III secretion system translocon subunit SctE
KO
K15345
secreted effector protein SseC
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_25590 (sctE)
Transporters [BR:
pcom02000
]
Other transporters
Pores ion channels [TC:
1
]
NTU39_25590 (sctE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
YkyA
Motif
Other DBs
NCBI-ProteinID:
UVA79322
UniProt:
A0ABY5QEV1
LinkDB
All DBs
Position
complement(5685114..5686490)
Genome browser
AA seq
458 aa
AA seq
DB search
MSDDWLALEDFLPDATDAGAWQDAEGAFARLLQRLYSLGNAMAADGMRPSSQFGVTDLAS
LETLDPSTLVMVASMISMQAMGDTAKSTQKALELLAERQDKLRQEDLQKFREQMDAATKD
ADKARKGGIFGVIFDWVVAAIDVVVGAVKVVTGVLTMNPLMIAGGIADVGAGVAGIGAAV
YKTMALVDPKNAEKYEAEATKWGYAQMAFQALGMIVGFGTSVRGFMASRSVTKTATRVMK
GGAGDALTKAVKAGDDAAIGAIKQRVVSEVSYQVGMEVGKRVGKSLAQNGTRTARNLVKR
GFNRMAEQFTQEMVERMVSRSFDNVVKSTGKQVAKGARVTATDVTKSFGKQIGSQGRRAI
VRGMWSLSGVIRGGVVGAREITAGAIGIQRAKLQRQARDMGTEMMWLQFLMELNGDDKKR
VAKRMETLSAQQGEIAESASDAVTKTGAVRIRIAASMA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgattggctcgcgttggaagacttccttcccgatgcgaccgacgccggggcg
tggcaagacgcggagggtgcgtttgctcgcttgctgcaacgcctgtactcgctgggcaat
gcgatggcggcggacggcatgcgtccctcatcgcagttcggtgtgaccgatctggcgagt
ctcgaaacgctcgatccgtccacactcgtgatggtggcgtcgatgatatcgatgcaagcg
atgggcgacacggcgaagtcgacacagaaggcgttggagctgctggcggagcgtcaggac
aagctgcggcaggaagacctccagaaattccgcgagcagatggacgccgccacgaaagac
gccgacaaggcgcgcaagggcggcatcttcggtgtgatcttcgactgggtcgttgcggcg
atcgatgtcgttgtcggcgccgtcaaggtcgtgaccggcgtgctgacgatgaacccgctg
atgattgcaggcggtattgcggacgtcggcgcgggcgttgcgggcatcggcgcggcggtc
tacaaaacgatggcgctcgtcgacccgaagaacgccgagaagtacgaggcggaagcgacg
aagtggggttacgcgcagatggcgtttcaggcgcttgggatgatcgttggcttcggtacg
tcggtgcgcggattcatggcatctcgctcggtgacgaagactgccacgcgtgtgatgaag
ggcggcgcgggcgacgcgctcacgaaagcggtgaaggcgggtgacgacgcagcgattggc
gcgatcaaacagcgtgtcgtctccgaggtctcgtatcaggtcggtatggaagtcggcaaa
cgcgtcggcaagtcgctcgcgcagaacggcacgcgcactgcgcgcaatctggtcaagcgc
ggctttaaccgcatggccgagcaattcacgcaggagatggtcgagcggatggtgtcgcgg
tcgttcgacaacgtcgtcaagtcgacgggcaagcaagtggccaagggcgcacgcgtgacg
gcgaccgatgtgacgaagtcgttcggcaagcagatcggctcgcagggacgtcgcgccatc
gtgcgtggcatgtggtcgctctccggtgtgattcgcggtggcgtggtcggcgcgcgcgag
atcacggcgggcgcgatcggcattcagcgcgcgaagctgcaacgccaggcgcgcgacatg
ggaacggaaatgatgtggttgcagttcctgatggagctcaacggcgacgacaagaagcgt
gtcgccaaacgcatggagacgttgtcggcgcagcagggcgagatcgcagaatcggccagc
gacgcggtgaccaagacgggcgctgtgcgcattcgcatcgctgcctcgatggcgtga
DBGET
integrated database retrieval system
