Pandoraea commovens: NTU39_25820
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Entry
NTU39_25820 CDS
T08365
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcom03009
]
NTU39_25820 (rsmI)
Enzymes [BR:
pcom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
NTU39_25820 (rsmI)
Ribosome biogenesis [BR:
pcom03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NTU39_25820 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
UVA79362
LinkDB
All DBs
Position
5733806..5734690
Genome browser
AA seq
294 aa
AA seq
DB search
MDERLMSLAEGQHYPPGTLYVVATPLGNTADITVRALHILGMVDAIACEDTRNSALLLQR
YGIDKPLIAAHQHNENEAATRLVERLRGGERIAYISDAGTPGISDPGARLVDAVRAAGLG
VVPVPGASAVITLLSAAGAWVETFTFVGFLPSKSQQRAQAIATLTGSTAAQVFYEAPHRI
VETVAALAEGLGGERRLLIGRELTKRFEDIHECALSEGVAWLKADANRQRGEFVLAVSGA
AASESDDGVDAEAQRILALLVAELPTKSAAKLAAAITGAPKNALYERALALKNG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcgtctgatgtcgctggccgagggtcagcactaccccccaggcaccctgtac
gtcgtggccaccccgttgggcaacacggccgacatcactgtgcgggccctgcatatcctc
ggcatggtcgacgccatcgcctgtgaagatacgcgcaacagcgcgttgttgttgcagcgt
tacggcatcgataagccgctgattgcggcccatcagcacaacgaaaacgaagcggcgacg
cgactcgtggagcgcctgcgcggcggcgaacggattgcctacatttcggacgctggcacg
ccgggcatctcggatccgggggcacgactggtcgatgcggtgcgtgcggcgggcctcggc
gtggtaccggtgccgggcgcgagcgcggtgatcacgttgctgtcggcggcgggcgcgtgg
gtggagacgttcacgttcgtgggcttcctgccgtcgaagtcgcagcagcgcgcacaggcg
attgccaccctcaccggatcgacggccgcgcaggtgttctacgaagcgccgcaccggatc
gtggagacggtggcggcactggccgaggggctgggcggcgagcgccgcctgctgatcgga
cgcgaattgaccaagcgcttcgaagacattcacgagtgcgcgttgagcgaaggtgtcgcg
tggctgaaggcggacgcgaaccgtcagcgtggcgaattcgtactggcggtctcgggtgcg
gcggcaagtgagagcgacgatggcgtggatgccgaagcgcagcgcatcctcgcactgctg
gtcgcggagctaccgacgaagagcgccgccaagctcgccgccgcgattacgggagcgccg
aagaacgcgctgtacgagcgggcgctggcgttgaaaaacggctga
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