Pandoraea commovens: NTU39_25920
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Entry
NTU39_25920 CDS
T08365
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pcom
Pandoraea commovens
Pathway
pcom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NTU39_25920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcom03400
]
NTU39_25920
Enzymes [BR:
pcom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NTU39_25920
DNA repair and recombination proteins [BR:
pcom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NTU39_25920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
zf-CHY
HypA
AAA_16
ADDB_N
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
UVA79380
UniProt:
A0ABY5QFU9
LinkDB
All DBs
Position
5759911..5762403
Genome browser
AA seq
830 aa
AA seq
DB search
MTRTDDLSEPSDASHDDALAPAAPPRAGTPAIARVALDTPLITLFDYRLDQAASLGQLVQ
VPFGRRQVVGVVWELTQRSEVAPAKLREVTSVWHELPPLGDDWRDLMQFASRYYQRGIGE
VALPAIPGHLRTPMRWPRLLAQRGVQRFRIADGALSTLMENVPARLRAQRRLAEGLAQAG
TLDADEAKALCSKAADALKQWAAAGWVVVETVPFHETVRDIEDAEDAEDAEDDEATDVGD
ASPAALAEVLDDDTDSASPLGTKTLTVGQADAVGAIHDALIAAGAQRLDQTTATDDAPDT
PACPPFLLYGVTGSGKTEVYLRAVAEALHTRDVRDAQVLVLVPEINLTPQLEGVFRARFP
DETLVTLHSGLAEGERARHWLAAHRGEARIVLGTRLAVMASLPHLRLIVVDEEHDPSYKQ
QEGLRYSARDLAIWRANRLRIPVVLGSATPSLDSWNRAEQGRYVRLAMPERATPDAVLPR
VSLIDMEIERKRQRVVHEGLSQPLLAAIRARLEAGEQSLLFLNRRGYAPVLNCDACGWIS
DCRRCSAHMVLHKPERRLRCHHCGAESRIPHACPDCGNLDLAPLGRGTQRIEEALAEHFP
DARLARIDADSTRRKGSAQALFAQVHAGEVDILIGTQMVAKGHDFRNVTLVGVVNADSAL
FSHDFRAAERLFAQLMQVAGRAGRAARADGPGDVLIQTRYASHPLFASLMRHDYAGFAAQ
QLEERRVALLPPYTHQALLRAEARKLDDAMAFLKQAREIAATPALNDPRISLWDPVPMTM
VRIAGTDRAQLVVESPHRGALQRFLTHWMSELRALKAPVRWHLEVDPLEI
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
ttgacccgcaccgacgacctttccgaaccgagtgacgcatcgcacgacgatgcacttgct
ccggcggccccgccccgtgcaggtacgcccgccatcgctcgcgttgcgctcgatacgccg
ctgatcacgctgttcgattaccgtctggatcaggcggcgagcctcggtcagctggtgcag
gttccgttcggacgacgacaggttgtgggcgttgtctgggaattgacgcagcgcagcgaa
gttgcgcctgcgaagctgcgagaagtgacgtctgtttggcacgaattgccgccgctcggt
gatgactggcgcgatctgatgcagttcgcgtcgcggtactaccagcgcggtatcggggaa
gtcgcactgcccgcgatccccggccatctgcgcacgccgatgcgctggccgcgtctgctc
gcgcagcgcggcgtgcaacgttttcgcatcgccgacggcgcgctgtccacgctgatggag
aacgtcccggcgcgactgcgcgcacagcgacggctcgccgaagggcttgcgcaggcgggc
acgctcgatgccgacgaagcaaaggcgttgtgttcgaaggctgcggacgcgctcaaacaa
tgggctgccgccggatgggtcgtcgtcgagaccgtgccgttccatgaaacggtgcgcgat
atcgaggatgcagaggatgcagaggatgcagaggacgacgaagctaccgacgtcggcgac
gcgtcgcccgccgccctcgccgaagtgctggacgatgacaccgacagcgccagcccgctc
ggaacgaagacgcttaccgtcggacaggcggacgcagtcggtgccatccacgacgccctg
atcgccgctggcgcccagcgtctggaccagacgacggccaccgacgacgcacccgacacc
cccgcttgcccgccctttctgctctacggcgtcaccggcagcggcaagaccgaagtctat
ttgcgcgcggtcgccgaagcgttgcatacgcgggacgtgcgcgatgctcaggtgctcgtt
ctcgtcccggaaatcaacctgacgccgcagctcgaaggcgtgttccgcgcgcgcttcccc
gacgagacgctcgtcaccctgcacagcggactggccgaaggcgagcgcgcccggcactgg
cttgccgcccatcgtggcgaagcgcgcatcgtgctcggcacgcgtctggcggtgatggcc
tcgctgccccacctgcggctgatcgtcgtcgacgaagaacacgatccgtcctacaaacag
caggaaggccttcggtactccgcacgcgaccttgccatctggcgggcaaaccgcctgcgt
atccctgtggtgctcggctcggccacgccgtcgctcgacagttggaaccgtgccgagcaa
ggccgctacgtgcgtctggccatgcccgagcgcgccacccccgacgccgtgctgccgcgc
gtgtcgctcatcgacatggagatcgagcgcaagcgtcagcgtgtcgtccacgaagggctg
tcgcagccactgctcgcggccatccgagcgcggctggaagcgggcgagcaaagcttgctg
ttcctcaatcgtcgcggttacgcgcccgtgctcaactgcgatgcctgcggatggatcagc
gactgccgccgatgcagcgcgcacatggtgctgcacaagcctgagcggcgcctgcgttgc
caccattgcggggcagaatcgcgtattccgcatgcgtgccccgattgcggcaacctcgat
ctggcgccgctcggacgcggcacgcaacggatcgaagaagcactcgccgaacacttcccc
gacgcgcggctcgcgcggatcgacgccgacagcacgcgtcgcaaaggcagcgcacaagcc
ctgttcgcacaggtgcatgcgggcgaggtcgacatcctgatcggcacgcagatggtggcc
aaaggacacgatttccgtaacgtcacgctggtgggggtggtcaacgccgacagcgccctc
ttctcgcatgacttccgggcggccgaacgtctcttcgcccagctcatgcaggtggcgggc
cgtgccggacgcgccgcgcgggccgacggccccggcgacgtgctgattcagacacgctac
gcgtcgcatccgctgttcgcgtcgctcatgcgccacgactacgcgggctttgccgcgcaa
caactggaagagcgccgcgtcgcactcttgccgccgtacactcatcaggcactcctgcgc
gccgaagcccgcaagctcgacgacgccatggcgttcctgaagcaagcccgcgaaatcgcc
gccaccccggcgctgaacgacccgcgcatctcgttgtgggaccccgtccccatgacgatg
gtccgcatcgcgggcaccgaccgggcgcaactcgtggtcgagagcccccaccggggcgcg
ctccagcgcttcctcacccactggatgagcgagttgcgcgcgttaaaagcgcctgttcgc
tggcatctcgaagtcgaccctctcgaaatataa
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