Pandoraea commovens: NTU39_26785
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Entry
NTU39_26785 CDS
T08365
Symbol
mnmC
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcom03016
]
NTU39_26785 (mnmC)
Enzymes [BR:
pcom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
NTU39_26785 (mnmC)
Transfer RNA biogenesis [BR:
pcom03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NTU39_26785 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
NAD_binding_9
Amino_oxidase
Pyr_redox_2
FAD_binding_2
NAD_binding_2
FAD_oxidored
HI0933_like
3HCDH_N
FAD_binding_3
Pyr_redox
Thi4
Motif
Other DBs
NCBI-ProteinID:
UVA79529
LinkDB
All DBs
Position
complement(5956318..5958339)
Genome browser
AA seq
673 aa
AA seq
DB search
MSHRPGTGPLVPAQASTTEDGTPYSEVFGDVYHSADDALGQTRHVFLEGNGLPGRWRERD
QFVIVETGFGLGLNFLATWAAWREDPQRPARLHFVSIEKFPFRPVDLRRMLEPMLVQPGM
TELAPLVQRLCDVWPAPVAGWHRLELAPGVVLSVGFGDVADLLPTARVGADAFYLDGFSP
AKNPDIWTLEVFKALGRLARDDATLATYTTEEQVRRDLVAAGFQVGQHDGDGPRRSMPAG
PLTGLYMPPYRMRRYDPPPAPAPRAREAIVVGAGMAGAAMARRLVARGWRVRLFERAQAP
GTAASGNPAGVFHPQLSADDNVLSRLTRAGFLYALSQWRTLPGGLPGHADGLLQVATSDT
EAQSLQQLMDAHAYPESYAKWVDVEQASALAGETLAYGGVWYPEGGWLAPSMLCRAELVA
AGPSLDARYGVSVERLERRDDGRWTALDDAGRVLAEADVVIVTAADVSQTLLSPFLAPGF
LPVRRVRGQLTFLPPDVLPGLRVPVCGDGYVAPSPLGGAGPITGATYGFDDPAEEVRLAD
HQANLRRLAAMLPAHAELFGDTGLANESAAAELGGRTAFRAMVPDRLPMAGQLPDLSAIE
PMRRRLTGGHLRDLPRLDGLYASFAFGSRGLVFASLCAELVASQIEGEPWPIGSDLADAI
DPARYLMHALRKA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccgtccgggcactggcccgctcgttcccgcccaggcgtcgacgaccgaagac
ggcacgccttactcggaagtgttcggggacgtctatcacagcgccgacgacgcgttgggt
cagacccgccatgtcttcctggaaggcaacggcctgcccgggcgctggcgcgagcgcgat
cagttcgtcatcgtcgagacgggcttcggtctgggccttaactttctggcgacgtgggcc
gcctggcgcgaagatccgcaacgtcccgcgcggctgcacttcgtctcgatcgaaaagttt
ccgttccggccggtggatctgcgacgcatgctcgaacccatgctcgtgcagccgggtatg
accgaactcgcgccgctcgtgcagcgactatgcgacgtgtggcccgcccccgtggcgggt
tggcatcgcttggaactggccccgggagtcgtgctgagcgtgggcttcggcgatgtcgcc
gatctgctgcctacggcgcgcgtcggggcggacgcgttttatctcgacgggttctccccg
gcgaagaaccccgatatctggacacttgaggtcttcaaggcgctcggacgtcttgcgcgc
gacgacgcaacgctggcgacgtacaccacagaggaacaggtcagacgcgacctcgtggcc
gccgggtttcaggtcgggcagcatgacggcgacgggccgaggcgctcgatgcccgccggg
ccgctcaccggactgtatatgccgccgtatcgcatgcgacgctacgatccgccgcccgca
cccgcgccacgtgcgcgggaagccatcgtcgtcggcgcaggcatggcgggcgctgcgatg
gcacgtcggctcgtcgcgcgcggctggcgcgtgcgtctcttcgaacgagcgcaggcccca
ggtaccgccgcctcgggcaacccggcaggcgtcttccatccgcaattatcggccgacgac
aatgtgctctcgcgactgacgcgcgccggctttctctacgcgctctcccagtggcggacg
ctgcccggtggtctgcccggacacgccgacggtttgcttcaggtcgccacgtccgacacg
gaagcgcaatccttgcagcaactcatggatgcgcacgcgtatccggagtcgtatgcgaag
tgggtggacgtcgagcaggcctcggcgctcgccggggagacgctcgcgtatggcggcgtc
tggtatccggagggcgggtggttggcaccgtcgatgctctgccgcgccgagctggtcgct
gccgggccgtcgctcgatgcgcgttacggtgtgagcgtcgagcggctggaacgccgtgac
gatggccgctggacggcgcttgacgacgcgggtcgtgtgctggccgaagcggatgtcgtc
atcgtgacggcggccgacgtctcccaaacgctgctctcgccttttctcgcacccgggttc
ctccccgtacggcgggtgcgcgggcaactcacctttctgccgcccgatgtcttgcccggc
ctgcgcgtgccggtctgtggcgacggctatgtcgcgccgtctcctctgggcggtgctggc
cccatcacaggtgcgacctacggtttcgacgatccggctgaggaagtgcgtctggctgac
catcaggcgaacctgcgacgtctcgctgcgatgcttcccgcccatgccgagctttttggc
gatacgggcctagccaatgaaagcgccgccgccgaactgggcgggcgcacggcgtttcgc
gcgatggtccccgaccgtctgccgatggcggggcagttgccggacctgagcgccatcgag
ccgatgcggcggcgtctgaccggcgggcatctgcgggatctgccacgtctcgacggcctg
tacgcgagcttcgctttcgggtcgcgggggctagtattcgcgtcgttgtgtgcggagctg
gtcgccagccagatcgagggcgagccgtggcccatcggcagcgatctggcagacgccatc
gatccggcgcgatatctgatgcacgcgctgcgcaaagcgtga
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