Pandoraea commovens: NTU39_26850
Help
Entry
NTU39_26850 CDS
T08365
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pcom
Pandoraea commovens
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcom03016
]
NTU39_26850 (mnmE)
Transfer RNA biogenesis [BR:
pcom03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NTU39_26850 (mnmE)
Prokaryotic type
Methyltransferases
NTU39_26850 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
GTP_EFTU
Ras
MCM
Roc
AAA_16
ABC_tran
AAA_29
Arf
Motif
Other DBs
NCBI-ProteinID:
UVA79541
LinkDB
All DBs
Position
complement(5971041..5972435)
Genome browser
AA seq
464 aa
AA seq
DB search
MSATVPTVPIAAIATAPGRGGIGVVRVSFGKHRGEAVQRVIARLVGQSLKPRHASYLPFL
DGAGDALDRGIALYFPGPNSYTGEDVLELQGHGGPIVLQLLLQRCIDEGAELGVRLAEPG
EFTHRAFLNDKLDLAQAEAVADLIEASTEAAARSASRSLDGAFSREIHSLVDLVIHLRML
VEATLDFPEEEIDFLEAADAFGQLERIRAQLAQVLSQAKQGALLREGINVVLAGQPNVGK
SSLLNALAGAELAIVTPIAGTTRDKVQQTIQIDGIPLHIIDTAGLRETEDEVERIGIERS
WSEIAKADAVLHLLDTRTGMTPEDEVIATQLPKHVPIVRVYNKTDLAGEPATVLPKEGAA
PLGVRLSAKGGQGIDFLRAELLKIAGWQAGNEGVFLARERHLSALRAARDHVEMADAHAR
QNAGALDLFAEELRLAQEQLSTITGEFTSDDLLGVIFSRFCIGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctaccgtccccaccgttccgattgccgccattgccaccgcccccggacgcggc
ggtatcggcgtggtgcgcgtctccttcggcaagcatcgcggcgaagctgtgcagcgtgtc
atcgcacgtctggtcggtcagtcgctcaagccgcgtcacgcatcgtatctgccgtttctg
gacggtgcgggcgacgcgctcgatcgcggtatcgcgctgtacttcccaggtccgaattcg
tacaccggcgaggacgtcctggagctgcagggccacggcggtcccatcgtgctgcaattg
ctgttgcagcgttgtatcgacgaaggggctgagcttggcgtgcgtcttgcggaaccgggg
gaattcacccatcgcgcgttcctgaacgacaagctcgatctggcgcaagccgaggcggtg
gccgacctgatcgaggcgagcaccgaggcggcggcacgctcggcgagccggtcgctggac
ggtgcgttctcgcgcgaaattcattcgctggtggatctggtgattcatctgcgcatgctg
gtggaagcgacgctcgacttcccggaagaagagatcgattttctggaggctgccgacgcc
ttcgggcaactcgaacgcatccgcgcgcagttggcgcaagtgctgtcgcaggcgaagcag
ggcgcgttgctgcgcgaggggatcaacgtcgtgctggcaggtcagccgaacgtgggcaag
tcgtcgttgctcaatgcactggccggcgctgagttggccatcgtcacgccgattgccggg
accacgcgcgacaaagtgcagcagacgattcagatcgacggcattccgttgcacatcatc
gacacagcgggattgcgggagacggaggacgaggtcgagcgcatcggcatcgagcgcagc
tggagcgaaatcgcaaaggcggatgccgtgctgcacctgctcgacacgcgcaccggcatg
accccggaagacgaagtcatcgcgacgcaattgccgaagcacgtgcctatcgtgcgtgtg
tacaacaagacggatctggcaggcgaaccggcgacggtactgccgaaggaaggcgccgcg
ccgctgggtgttcgcttgtcggcgaagggcgggcaggggatcgatttcctgcgtgccgaa
ttactgaagatcgcgggatggcaggcgggcaacgaaggtgtgttcttggcgcgggagcgt
cacctgtcagcgctacgcgcggcacgggatcacgtcgagatggcggacgctcatgcgcgt
cagaacgccggtgccctcgacctcttcgccgaggaattgcgtctcgcccaggaacaactc
agcacgatcaccggcgagttcacctcggacgatttgctgggggtgattttcagtcggttt
tgtattggaaaataa
DBGET
integrated database retrieval system
