Paracoccus contaminans: B0A89_00115
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Entry
B0A89_00115 CDS
T04876
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pcon
Paracoccus contaminans
Brite
KEGG Orthology (KO) [BR:
pcon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcon03016
]
B0A89_00115
Enzymes [BR:
pcon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B0A89_00115
Transfer RNA biogenesis [BR:
pcon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B0A89_00115
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ARJ68302
UniProt:
A0A1W6CTT8
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All DBs
Position
complement(21968..23149)
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AA seq
393 aa
AA seq
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MTAEPRIIATTDELSAFCELAKAQPYVTLDTEFLRERTYYSRLCLIQMALPPASGPKLAG
GPAALIDPMAEGLSLEPLYDLFRHEATVKVFHAARQDLEIFFHDAGIFPTPLFDTQIAAM
VCGFGEQAGYETLVRKIARQPLDKSSRFTDWSRRPLTPAQADYALADVTHLRAIYEHLSA
ELARTGRGPWVAEEAAVLVDPATYTTHPDDAWERVRTRSGSPRFLAIVRELARFRETYAQ
SNDVPRSRVFKDDALIELASTRPLTEEELSKSRLLLREARRGEIAQGILAAVKAGLETTD
LPKAEPPDPGRPGNGALAELLRVLLRAKADAADVAPRLIASAAELDAIAAGARDVPALSG
WRAEVFGDDALRLAQGRIALSASGGAIKVVPVP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgagccgcgcatcattgccaccaccgatgaactgtccgccttttgcgagctg
gccaaggcccagccctatgtcacgctcgacaccgaattcctgcgcgagcggacctattat
tccaggctttgcctgatccagatggcgctgccgccggcatccggccccaagcttgccggc
ggccccgccgcgctgatcgaccccatggccgaaggactgtcgctcgagccgctgtatgac
ctgttccgccacgaggcgacggtcaaggtgttccacgccgcgcgccaggatctagagatc
ttctttcacgacgcggggatctttcccacgccgctgttcgacacccagatcgcggcgatg
gtctgcggctttggcgagcaggcgggttatgaaacgctggtgcgcaagatcgcgcgtcag
ccgctcgacaagtcctcgcgcttcaccgactggtcgcgccgcccgctgacgccggcgcag
gccgattacgcgctggcggacgtgacccatctgcgggcgatctatgaacatctgagcgcc
gagctcgcccgcaccggccgcggcccctgggtcgccgaggaggcggcggtgctggtcgat
cccgcgacctacaccacccatcccgatgatgcctgggaacgggtgcggacccggtcggga
tcgccgcggttcctggccatcgtgcgcgaactggcacggttccgcgagacttacgcccag
tcgaacgacgtgccccgctcgcgcgtgttcaaggacgatgcgctgatcgagctggcctcg
acccgcccgttgaccgaggaagagctgtccaagtcgcggctgctgctgcgcgaggcgcgg
cggggcgagatcgcgcagggaatcctcgccgcggtcaaggcggggcttgagacgacggac
ctgcccaaggccgaaccgcccgatccgggccggcccggcaacggcgcgctggctgaactg
ctgcgcgtgctgctgcgggccaaggccgatgcggccgacgtggccccgcggctgatcgca
tcggcggccgaactggacgcgatcgcggccggggcgagggatgtgccggcgctgtccgga
tggcgcgccgaggtgtttggcgacgacgccctgcggctggcgcaggggcggatcgcgctg
tcggcctcgggcggtgcgatcaaggtcgtgccggtgccgtaa
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