Paracoccus contaminans: B0A89_02815
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Entry
B0A89_02815 CDS
T04876
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
pcon
Paracoccus contaminans
Pathway
pcon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0A89_02815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcon03019
]
B0A89_02815
03009 Ribosome biogenesis [BR:
pcon03009
]
B0A89_02815
Enzymes [BR:
pcon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B0A89_02815
Messenger RNA biogenesis [BR:
pcon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B0A89_02815
Ribosome biogenesis [BR:
pcon03009
]
Prokaryotic type
rRNA processing factors
B0A89_02815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ARJ70668
UniProt:
A0A1W6D0P5
LinkDB
All DBs
Position
complement(587134..589980)
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AA seq
948 aa
AA seq
DB search
MAKKMLIDATHPEETRVVVADGTRVEDFDFETVNKRQLAGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFAEIHPDYYQIPAADRRALIEEDRAAAQADEDEEHARERRGSKGRRSRAR
GDERTAERAERAAGGDAVTRSDAIQGMEIADTAEAEDEAAVEAGFAAAPGDEVDPSLAGQ
GGDEAAPERTAEPPADEDAPGEDMQGEDNPADEIESVAEEDVAEEIRPARKPRARRYKIQ
EVIRVRQIMLVQVVKEERGNKGAALTTYLSLPGRYCVLMPNTARGGGISRKITNVADRKK
LKEIAAELEVPQGAGLIIRTAGSQRTRTEIKRDYEYLMRLWDQIRERTFRSIAPAAIYEE
GDLIKRSIRDLYGNDIDEVWVDGERGYRTARDFMAMIMPDQVRAVRHYTDPMPLFARHQV
ESYLAGMFNPTVQLKSGGYIVIGITEALVAIDVNSGRATKEGSIEETAFKTNCEAADEIA
RQLRLRDLAGLIVIDFIDMDERRNNAAVEKRFKDALKNDRARIQVGRISGFGLMEMSRQR
LRPGMLESTTQPCAHCHGTGLIRSDDSMALTILRAIEDEGTRKRSREVLVRAPVAVANFL
MNHKREHLGMIETRYGLSVRLEADPALISPDFTMEKFKTASRSVPEAVSGALSVDASLMA
QIDEAEDTLPVEMAEPEAERPDAAAMRPASEAADDADEGRTRRRRRRRRGGRGDDEGAAE
EAGGSESAEDAAPAEAAAPEGDEAEGGGRSRRRGRSRRRKDRDSGASSEATAPMGAILDE
SRDAAAGVPQDIETGGIPANADGLGAWPEHDALQGDPADAAAMPAADAPADGAFPLATLS
DAQDGAAGSAAAQDQPVHPDDPGRPEEQDGEPALSRNEPAAPVALAHEAAPAVEADPIPD
AAAFPQADDAGDQSPPADIAQPPAGADAPAPRASDPNRPRRRGWWSQG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaatgctgatcgacgccacgcatccggaggaaacccgggtcgtcgtggcc
gatggaacgcgggtcgaagactttgacttcgagacggtgaacaagcgccagcttgctggc
aacatctatctggcaaaggtcacgcgggtcgagccttcgctgcaggccgccttcgtggaa
tatggcggcaaccgccacggctttctggccttcgccgagatccaccctgactattaccag
atccccgccgccgaccgccgcgccctgatcgaggaagaccgcgccgccgcccaggcggac
gaggacgaggaacacgcccgcgagcgccgcggcagcaaggggcggcgcagccgcgcccgc
ggcgacgagcggacagccgaaagggccgagcgtgccgcaggcggcgatgcggtcacccgc
agcgatgcgatccagggcatggagatcgccgataccgccgaggccgaggacgaggccgcc
gtcgaagccggctttgccgcggccccgggggatgaggttgatccttcgctcgcagggcag
ggcggggatgaggccgcgcccgagcgcacggccgagccgcccgccgacgaggatgcgccg
ggcgaggacatgcagggcgaggacaatcccgccgacgagatcgaatcggtcgccgaggag
gacgtggccgaggagatccgcccggcccgcaagccgcgtgcccgccgctacaagatccag
gaggtcatcagggtccggcagatcatgctggtccaggtggtcaaggaggaacgcggcaac
aagggcgcggcgctgacgacctatctgtcgctgcccggacgctattgcgtgctgatgccc
aacaccgcccgcggcggcgggatttcccgcaagatcaccaatgtcgccgaccgcaagaag
ctcaaggagatcgcggccgaactcgaggtgccgcagggcgccgggctgatcatccgcacc
gccggcagccagcgcacccggaccgagatcaagcgcgactatgaatatctgatgcggctg
tgggaccagatccgcgaacgcaccttccgctcgatcgcgccggcggcgatctatgaggaa
ggcgatctcatcaagcgctcgatccgcgatctttacggcaacgacatcgacgaagtgtgg
gtcgatggcgagcgcggctatcgcaccgccagggacttcatggcgatgatcatgcccgac
caggtccgggcggtcaggcattacaccgatccgatgcccctgttcgcgcgccatcaggtg
gaaagctatctggccgggatgttcaacccgaccgtccagctgaaatcgggcggctatatc
gttatcggcatcaccgaggcgctggtggccatcgacgtgaactcgggccgggcgaccaag
gaaggctcgatcgaggaaaccgccttcaagaccaactgcgaggccgccgacgagatcgcg
cgccagttgcggctgcgcgacctggcggggctgatcgtcatcgacttcatcgacatggac
gagcggcgcaacaatgcggcggtcgaaaagcggttcaaggacgcgctgaagaacgaccgg
gcgcggatccaggtcggccgcatttccggctttggcctgatggagatgagccgccagcgg
ctgcggccgggcatgctggaatcgaccacccagccctgcgcccattgccacggcaccggc
ctgatccggtcggacgattcgatggcgctgaccattctgcgggcgatcgaggacgagggc
acgcgcaagcgatcgcgcgaggttctggtcagggcgccggttgcggttgctaatttcctg
atgaaccacaagcgagagcatctcggcatgatcgagacgcgctatggactgtcggtgcgg
ctcgaagcggacccggcgctgatttcgcccgatttcaccatggagaagttcaagaccgcc
tcgcggtcggtgcccgaggcggtgtcgggcgcgctttcggtggatgccagcctgatggcg
cagatcgacgaggccgaggataccctgccggtcgagatggccgagccggaggccgaaagg
ccggatgcggctgcgatgcggccggccagcgaggccgcggatgacgcggatgagggccgg
acgcgccgtcgccggcgccgccgccgcggtggacgcggggatgacgagggcgcggcagag
gaagccggtggcagcgagagcgccgaggatgctgcccctgcagaggctgccgcccccgag
ggtgacgaggccgagggcggcggccgttcgcgccggcgcggccgctcacggcggcgcaag
gaccgcgattcgggcgcctcatccgaggcgaccgcccccatgggcgccatcctggacgaa
agccgcgatgccgcggcgggcgttccccaggacattgagaccggcggcatcccggcaaat
gccgatgggctgggcgcctggccggagcatgacgccctgcagggtgatcctgcagatgcc
gcagccatgcccgccgccgatgcgcccgccgatggagcctttcccctggcaactctgagc
gacgcgcaggatggcgccgcgggcagcgccgctgcccaggaccagccggttcatccggac
gatccgggccgcccggaggagcaggatggcgagccggccctcagccgcaacgagcctgcg
gcgccggtcgcccttgcgcatgaagctgccccggctgtcgaggctgacccgatccccgat
gcggccgcattcccgcaagccgatgacgcaggggaccagtccccgccggcggatatcgcc
cagcccccggccggggccgatgccccggcgccccgggcgtccgacccgaaccgcccgcgc
cggcgcggctggtggtcccagggctga
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