Paracoccus contaminans: B0A89_04615
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Entry
B0A89_04615 CDS
T04876
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcon
Paracoccus contaminans
Brite
KEGG Orthology (KO) [BR:
pcon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcon03016
]
B0A89_04615
Enzymes [BR:
pcon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B0A89_04615
Transfer RNA biogenesis [BR:
pcon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B0A89_04615
Prokaryotic type
B0A89_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ARJ69019
UniProt:
A0A1W6CW66
LinkDB
All DBs
Position
960833..961729
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AA seq
298 aa
AA seq
DB search
MARRKGRDISGWLLVDKPAGIGSTDIVGKVRWALDARKAGHAGTLDPDATGLLAIALGEA
TKTVPYLADALKAYDFTVTWGTETASDDAAGAVTRRSDARPDPQAIEAALPAFRGAIMQV
PPAVSAVRVDGARAYDLAREGEAVTLASRPLWVEELTLTAARADGADFRMVCGKGGYVRA
IARDLGRALGCLGHVASLRRIWSGPFDVADALALSGIDRASQAALDAALLPIQSALDLPE
MPATDLGALRIRNGNPGQVLGIADYGAEVWVSHNGRAIAIGRYMGGEVHPARVFAQAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaggaaggggcgggacatctcgggctggctgttggtggacaagccggcgggc
atcggatcgaccgatatcgtgggcaaggtgcgctgggcgctggatgcgcgcaaggcgggc
catgccggaacgcttgaccctgatgccaccgggctgctggccatcgcgctgggcgaggcg
accaagacggtcccctatctggcggatgcgctcaaggcctatgatttcaccgtcacctgg
gggaccgagacggccagcgacgacgcggcgggggcagtgacgcgccggtcggacgcacgc
cccgatccgcaggcgatcgaggcggcgctgccggcctttcggggcgcgatcatgcaggtt
ccgccggccgtctcggccgtgcgggtggacggcgcgcgcgcctatgacctggcgcgcgag
ggcgaggcggtgacgctcgcctcccggccgctgtgggtcgaggaactgacgctgacggcg
gcgcgggcggacggcgccgatttccgcatggtctgcggcaagggcggctatgtgcgcgcg
atcgcccgcgatctggggcgggcacttggctgcctgggccatgtcgcatccctgcggcgc
atctggtccggccccttcgatgtcgccgacgcgctggcactttccggcatcgaccgcgcc
agccaggccgccctcgatgcggcgctgctgccgatccagtcggcgcttgacctgcccgag
atgccggccaccgacctgggcgcgctgcgcatccgcaacggcaaccccgggcaggtgctg
ggaatcgccgattacggggccgaggtctgggtcagccataacgggcgcgccatcgccatc
ggccgctatatgggcggcgaggtccaccccgcccgcgtctttgcccaggcgggctga
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