Paracoccus contaminans: B0A89_11920
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Entry
B0A89_11920 CDS
T04876
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pcon
Paracoccus contaminans
Brite
KEGG Orthology (KO) [BR:
pcon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcon01002
]
B0A89_11920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcon01011
]
B0A89_11920
Peptidases and inhibitors [BR:
pcon01002
]
Cysteine peptidases
Family C82
B0A89_11920
Peptidoglycan biosynthesis and degradation proteins [BR:
pcon01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
B0A89_11920
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ARJ70899
UniProt:
A0A1W6D1I7
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All DBs
Position
2503735..2505366
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AA seq
543 aa
AA seq
DB search
MPRRGRARIITGALAAAIAALGLAGPMQAAAPAPRLDFSADEMALARGVARNPGLAAWYG
GTALAPVFTAPQQAPRRAALLAALGSAATHGLPDVYDAAALAAMEGRTDPGAEAAFARSF
ARWTHDVGGGIVNPRPLDPGILREVPRVPTETLLARFVAAPDPAAMLDTVPPQSREYRAL
REALTAAIGPVAGADLPTVPGGPWREGMQDPGVAALRLRLAAMGFDAESDTPDLFDAALA
GQLAAYQRRAGLPPDGVAGPRTLARVNGAAQGAPQGLLIALERMRWMGTHDLDARMVWVN
LPEFVARVKEGGATVFQTKVVIGSDAPDRRTPEFSDEMEDVVVNPRWNVPRSITTKEYLP
RLQKNRNAVAHLDVVDSRGRVIPRESVDFGRYTAGNFPYRLRQKPSDDNALGEVKFIFPN
SMNIYLHDTPSKGLFNESRRAFSHGCIRVARPVELAEVLLEGTAADPAARYARARASGRE
TFLELTPHLPVHLVYFTTTVDENGRIRSLPDVYGRDPLVWAALVKAGLGRDNGRGLETAA
LAE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgccccgaaggggcagggcgcgcatcatcaccggcgccttggccgcggcgatcgccgcg
ctgggccttgcggggccgatgcaggccgcggccccggcgccccggctggatttttcggcc
gacgagatggcccttgcccgcggggttgcgcgcaatccgggcttggccgcctggtatggc
ggcaccgcgctggcccccgtctttaccgcgccgcagcaggcgccgcggcgggcggcgctg
ctggccgccctcggctcggccgcgacccatgggctgcccgatgtctatgacgccgccgcg
cttgccgcgatggaggggcgcaccgatcccggggccgaggcggcctttgcgcgcagcttt
gcccgctggacgcatgatgtgggcggcgggattgtcaatccgcgcccgctcgaccccggc
atcctgcgcgaggtgccgcgggtgccgacggaaaccctgctggcgcggtttgtcgccgcg
cccgacccggcggcgatgctggacaccgttccgccccaatcgcgcgaataccgcgccctg
cgcgaggcgttgacggccgcgatcgggccggtcgcgggcgccgatctgcccacggttccg
ggcggtccctggcgcgaggggatgcaggatccgggcgtggcggcgctgcgccttcggctt
gcagccatgggctttgacgctgaaagcgacacccccgatctgttcgacgcggcgctggct
ggccagctcgccgcttatcagcgcagggcgggcctgccgcctgacggggtggccgggccg
cgcacccttgcccgcgtgaacggcgccgcccagggcgcgccgcagggcctgctgatcgcg
ctggaacggatgcgctggatgggcacgcatgatctggacgcgcgcatggtgtgggtcaac
ctgcccgagttcgtcgcccgcgtgaaggaaggcggcgccactgtctttcagaccaaggtg
gtgatcggcagcgacgcgcccgaccggcgcacgcccgaattctcggacgagatggaggat
gtcgtcgtcaacccccgctggaacgttccgcgctccatcaccaccaaggaatacctgccc
cgcctgcagaagaaccgcaacgccgtggcgcatctggacgtggtggacagccgcggccgc
gtcatcccgcgcgagtcggtggatttcggtcgctatacggcgggcaactttccctatcgg
cttcgccagaaaccaagcgacgacaatgcgcttggcgaggtgaagttcatctttcccaac
agcatgaacatctatctgcacgacacgccctcgaagggcctgttcaatgaatcgcgccgc
gccttttcgcacggatgcatccgcgtggcgcgccctgtcgaactggccgaggtgctgctt
gaaggcacggccgccgatccggcggcgcgctatgcccgcgccagggcgtccggccgcgag
accttccttgagctgacgccgcatctgccggtgcatctggtctatttcaccaccaccgtg
gatgagaacggccgcatccgcagcctgcccgatgtctatggccgcgacccgctggtctgg
gcggcgctggtcaaggcggggctgggccgcgacaatgggcgcgggctggaaaccgctgcc
ctggcagagtag
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