Puma concolor (puma): 112848758
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Entry
112848758 CDS
T08890
Symbol
NPHP4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcoo03037
]
112848758 (NPHP4)
Cilium and associated proteins [BR:
pcoo03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
112848758 (NPHP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
112848758
NCBI-ProteinID:
XP_025768341
UniProt:
A0A6P6GYV3
LinkDB
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Position
Unknown
AA seq
1708 aa
AA seq
DB search
MKDWLRIFDQNVLVPPHPQRARQPVKESTAFQCVLKWLDGPLIKQASVSFRGREPGEKLV
LLRCPRDSHVIGGFHADAVPGTLPVQSHSSAPLSRFDLRSPAAILSASSSLYFHTSLNHP
NIVAVVEVVTEGRRPDGSLQALSCGFGILRIFGNKLESPTSASQDKRLKLYHGTPRALLH
PLLHDPVERIVVFVSWSQSCCSVGSMMQVLSGEGRQAGAQGAFWTPGDNGDRAVSGLRDS
GVLEVLSEVGCCLRVSLFDVTYRHFFGRTWKTAVRPVEQLSRQPSRIVFDEVGLGGLDSR
ISTRLTVHVPLKAAACKESPHTLASSESLPWGSLACSRGRRARAATTAASGAEHLTMDLC
QGLSGTLFVWAQPVPICCVSDVAPRLLWPAGGLLVAGLSLVCCRRRVLRWALELLCRCRC
VGRQFSHSQERRDCSVTREGVACAPRQHACAGNVFLLVTVGEGRRPCAEGDALRKPRLQK
SVTWDLDDLFFTLYPSLEKFEEELLELLVSDRFREEGIPRDSGTLEILERRLCVGVHNGL
GFVQRPQVVVLVPEMDVALTRSASFSRKVGSSSKASSGNQALVLRSRLRLRELIRHPAFA
IVFQLEYVFNSPSGADGKATSVTSLSSVACMHMVRWAVWNPLPEAGSGKVVLPLQGGIRP
NPSHRLVYKVPPACMSSKEVEQVTSGTVQFQYSLSPKGHLDTLPGHGHGPEAEQQPSRKP
PASPASPPALPARGHAAPQDSPVGPGLSLSQLAASPRSSASCCLATPGRPQPAGSEPSPA
QEQGLPLEGRICHLEAELSQASLVLGASVAEHLQELPFTPVHVPIVAGIQARSSGSKLSR
ASMVLLQASGFPEILDANKQPAETVNPADPVQFNPQKEESDCLQGNEIVLQFLAFSRVSQ
DSRAAPWPKTVYFTFQFYRFPPVTTPRLQLVRLDEAGRTLPGSLLHLLVLADRDDSSDAG
SPGFQLKFLAEPGFLRPGEQSRFSHYLAAQALQVDVWDGDSLLLVGSAAVPMKHLLRQGR
PAVQVSHELEVVATEYEQDVVVSGDVTRLGSIQPIGVYAVVKGWLHLTLANIGHVCEQRG
KDSSTLPPSRSRVISNDRTGHFEGGSLLRRGAPRPVKNVVQAQKLADVDCELAAMLFVPT
QRRSKGPQGAGREGDAVRRRKLERMRSVRLQESRGELSCWGASMLAQQSIRAQHARDLQV
IAAYRERMKAESITSALSLAITTKHTVHVTLGTAEFFEFALRNPHNTQHTVTIEVDSPEL
SIISDSREWRFFKDAAKLHTPVEEDMFRLRGGLAPQLFLRPRETAHIPFKYQTFSVGQDP
AEPSSEKGMDPGSPQKRSATPTKHAKVRGWEASGPRHSQGLAVRAREQREEARDPKTRGL
SVGGEPETCLEEGAILPFRVCGVDGRTLDPSPAVGRAPVGSGQRVRAQMMGPWELLSQPG
APVGRPGEEPQVHVRCSDPNVICETQNVGPGEPRDVFLKVASGRSPESKDFFVLVYTDRW
LATPVQIWQIHLHSLQRVDVSCVTGQRTRLSLVLRGTQAVRRVRAFTSHPQELTTDPRGV
FVLPPRGVQDLHVGVTPRRAGTRFIHLNLVDVDYHQLVASWLVCLSCRPPLISKAFEITL
AAGEGKGANKRITYTNPYPTPRTYRLLSDRPDLLQFREESFQVGGGETYTIGLRFASRQS
TGEEEILIYINDHEDKNEEAFCVKVTYQ
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactggctcaggatttttgaccaaaacgtgctggtccctccccacccacagaga
gcacgccagcctgtaaaggaatcgactgcgtttcagtgcgtcctgaagtggcttgatggg
ccgctaattaagcaggcgtccgtgtccttccggggcagggaacctggggagaagctggtg
cttctgcgctgcccgcgggacagtcacgtgattggaggcttccatgcggatgcagttccg
gggacgctcccagtgcagagccacagctcagcacctctgtctaggtttgacctgcgaagc
ccggccgcgatcctgtccgcatcctcgtccttgtattttcacacgtccttaaaccaccct
aacatcgtggctgtggtcgaagtggtcaccgagggcaggaggccggatggctccctccag
gctttgtcatgtgggttcggaattcttcgcatcttcggcaacaagctggagtctcctacc
tcagcctcccaggacaagcggttgaagctgtaccacggcaccccccgcgccctcctgcac
ccgcttctccacgaccccgtagaacgtatcgtggtgtttgtgtcttggtcccagtcctgc
tgctccgtgggctcgatgatgcaggtgctgagtggggaagggaggcaggctggggcccag
ggtgccttctggacccctggtgataatggggaccgggcggtttctggacttcgtgactcg
ggagtgctggaggtgctctcggaggtgggctgctgtctgcgtgtgtccctctttgatgtc
acctaccgacactttttcgggaggacgtggaagaccgccgtgaggcccgtggagcagctc
tccaggcagccgtccaggatcgtcttcgatgaggtgggccttggcggcctggacagccgc
atcagcaccaggctgactgttcacgtgcccctgaaagctgctgcttgcaaggagagcccc
cacaccctggcttcgagcgagtctctgccctggggctccttggcctgctctcgtggccgc
agagctcgagctgccaccacggcagcgtctggagcagagcacttgaccatggacctctgc
caggggctcagtgggacgctgttcgtgtgggcccagcccgtccccatctgctgcgtctcg
gatgtggctccgcgcctgctgtggcctgctggtggcctgctggtggccggcctgtccttg
gtctgttgtcgccgtcgcgtgttacgttgggccctggagctgttgtgtcgctgccgctgt
gttggccgacagttcagccacagtcaagagcggagggattgttcggtgacccgcgaagga
gttgcttgtgctccgaggcagcatgcgtgtgcgggcaatgtgttccttctggtgactgtg
ggagaagggcgccggccgtgtgctgagggggatgccctccgaaagcctcgccttcagaag
tctgtcacgtgggacttggatgatttgttcttcacgctctatccttccctggagaaattt
gaggaagagcttctggaactcctcgtcagtgatcgcttccgggaggagggcattccgcgg
gacagcggcacgctggagatcctggagcggcgcctgtgcgtgggtgtgcacaacggtctg
ggcttcgtgcagaggccgcaggtcgtggtgctggtgcccgagatggacgtggccttgacg
cgctctgccagtttcagcaggaaagttggctcttcttcaaaggccagctctggaaaccag
gctctagttttgagaagccgcctccgactccgtgagctgatccgtcaccctgcgttcgcc
atcgtctttcagctggagtacgtgttcaacagcccttcaggggcagacggcaaggcaacg
tcggtcacctctctgtccagcgtggcatgcatgcacatggtccgctgggctgtgtggaac
cccttgccggaagccggctccggaaaggtggtcttacctctgcagggtgggatccggccc
aacccatcgcaccgtctggtctataaagtgcccccagcctgcatgagctccaaagaggtg
gagcaggtgacgtcggggacggtccagttccagtactcgctgagccccaagggacacctg
gacacgctgccagggcacggccacggcccggaggcagagcaacagccctccaggaagcca
cccgcgtcccctgcaagcccaccagcgctgccagcccggggacacgctgccccccaggac
tcgcccgtgggaccagggctgtctctctcccagctggcggcttccccacggtcctcagcc
tcgtgctgcctggccacaccaggtcgcccccaacctgccggctctgagccctccccggcc
caggaacaggggctccctttggagggcaggatctgtcacctggaagccgagctgagccag
gcgtccttggtcctgggagcatctgttgccgaacacttgcaggagctgcctttcacaccg
gtgcacgtcccgattgtcgcgggcatccaggccaggagctctggaagtaagctctcgcgg
gcctcgatggtgctcctgcaggcctccggttttcctgagattctggatgccaataagcaa
ccagccgagactgtaaatcccgcagaccccgtgcaattcaaccctcagaaggaagaatcc
gattgtctacaaggcaacgaaatagtactgcagtttcttgcctttagcagagtgtcccaa
gacagccgggcagcgccgtggccaaagaccgtgtatttcaccttccagttctaccgtttc
ccgcccgtgacaacgccgcggctgcagctggtcaggctggacgaggcgggcaggacgctc
cccggttctctgctgcatctcctggttcttgccgacagagatgattcctccgatgctggc
tctcctggctttcagctcaagttcttggcggagcctggattcctgaggcccggagagcag
agtcggttcagccactacctggccgcgcaggccctccaggtggacgtctgggatggagac
tctctgctcctcgttggatctgcagccgtcccgatgaagcatctccttcgccaggggcgg
ccggccgtgcaggtctcgcacgagctcgaggtcgtggcgaccgaatatgaacaggacgtg
gtggtgagtggggacgtgaccaggcttggcagcatccagcccatcggcgtctacgcggtg
gtgaagggctggctacacctgaccctggccaacataggtcacgtgtgtgagcagagagga
aaggattccagcacgttgccaccctccaggtcacgggtcatctcgaatgacagaaccggc
cacttcgagggaggcagcctgcttaggcgcggggcgccgagaccagtaaaaaacgtggtc
caagcacagaagctggctgatgtggactgtgaattggccgccatgctgtttgtgcccacg
cagcgcaggagcaaagggccccagggcgccggccgcgagggggacgccgtccgcaggcgc
aagctggagcggatgagatccgtgcgccttcaggagtcccgaggagagctcagctgctgg
ggggccagcatgttggctcagcagagcatccgcgcacagcacgcacgtgacctgcaggtc
attgccgcctatcgggagcgcatgaaggcggagagcatcaccagcgcgctgagcctggcc
atcaccacgaagcacaccgtgcacgtcacgctgggcaccgccgagttcttcgagttcgcc
cttcggaacccccacaacacgcagcacacggtgaccatcgaggtggacagccctgagctg
agcatcatctcggacagtcgggagtggaggttcttcaaagacgcggccaagctgcacacg
ccggtggaagaggacatgttccgtctgcggggcggcctcgccccacagctcttcctgcgc
ccccgggagaccgcccacatccccttcaaataccagaccttctccgtggggcaggaccct
gctgagccgagctctgagaagggcatggaccccggatcgccccagaagcgcagtgcaacg
ccgaccaagcacgccaaggtaagggggtgggaggcctctggtccccgacattcgcagggt
cttgcggtgagagccagggaacagagggaagaagccagagatcctaagactcgggggctc
agcgtgggcggtgagcctgagacttgtctcgaggagggtgccatcctgccgttcagggtc
tgcggtgtggacggtcgcactctggatccaagccccgctgtagggagggctcctgttggt
tctggccagagggtccgggcacagatgatgggcccatgggagctgctctcgcagccgggt
gctcctgtgggaagacctggcgaggaaccccaggtccatgtccgatgtagtgacccgaat
gtcatttgtgagacccagaatgtgggccctggggagccacgggacgtgttcttgaaggtg
gctagtggtcggagcccagagagcaaagacttctttgtcctcgtttacacggatcgctgg
ctggcgacacctgtccaaatatggcagatccacctccactccttacagcgcgtggacgtg
tcctgcgtcacaggccagcggacccgcctgtcccttgtccttcgggggacacaggcggtt
aggagagtgcgagctttcacctcacacccccaggagctgacaactgaccccagaggtgtg
ttcgtgctgccccctcgcggggtgcaggacctgcatgtgggcgtgacgccccggagggcg
gggacccggttcatccacctcaacctggtcgatgtggactaccaccagctggtggcctcg
tggctcgtgtgcctctcgtgccgccctcctctcatttccaaggccttcgagatcacgctg
gccgcaggggaaggcaagggcgccaacaagcgcatcacctacaccaacccctaccccacc
ccgaggacctaccgcctgctcagcgaccgcccagacctgctgcagttcagggaggagtcc
ttccaggttgggggaggagagacctacaccatcggcctgcggtttgcatctcgccagagc
accggggaagaagagattctgatttacatcaacgaccacgaagacaaaaacgaagaggcc
ttctgcgtgaaggtcacctaccagtga
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integrated database retrieval system
