Puma concolor (puma): 112848810
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Entry
112848810 CDS
T08890
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112848810 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoo03041
]
112848810 (PRPF40A)
Spliceosome [BR:
pcoo03041
]
Complex A
U1 snRNP components
U1 related factors
112848810 (PRPF40A)
Complex B
112848810 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
112848810
NCBI-ProteinID:
XP_025768395
UniProt:
A0A6P6GYA6
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQ
MMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTASGAKSMWT
EHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKES
RWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEETSKQEECTTTSTAPVPTTEIPTT
MSTMAAAEAAANASASTSASNTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLT
STPAVQDQNMEVSSNTGEETAKQEAVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKEL
LKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEA
KESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQA
KQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEE
HIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSD
IRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAII
SSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIEL
DAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHR
KRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKS
DSPESDAERDKDKKEKDRENEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELE
KRRRTLLEQLDDDQ
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggacg
ggagctgagcgtggaggcctcatgatggggcaccctggcatgcattatgccccaatggga
atgcaccctatgggtcagagagccaatatgcctcctgtacctcatggaatgatgccgcaa
atgatgccccctatgggagggccgccaatgggacaaatgcctggaatgatgtcttcagta
atgcctggaatgatgatgtctcatatgtctcaagcttccatgcagcctgccttaccgcca
ggagtaaataatatggatgtagcagctggtacagcgtctggtgcaaaatcaatgtggacc
gaacataaatcacctgatggaaggacttactactacaatactgaaacaaaacagtctact
tgggagaaaccagatgatctgaaaacacctgctgagcaacttttatctaaatgtccctgg
aaggaatacaaatctgactctggaaagccttactattataattctcaaacaaaagaatcc
cgctgggccaaacctaaagaacttgaggatcttgaaggataccagaataccattgttgct
ggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaaccagtaag
caagaagagtgcaccacaacatcaacagccccagttcctacaaccgaaattccgaccaca
atgagcaccatggctgccgcagaagctgcagccaatgccagtgcttccacctctgcttct
aatactgtgggtggaactgttccagttgttcctgagcctgaggttacttcgattgttgct
actgttgtagataacgaaaatacagtaacaatttcaactgaagaacaagcacaacttact
agtactcctgctgttcaggatcagaatatggaagtatccagtaatactggagaagaaaca
gctaagcaggaagcagtagctgattttactcccaaaaaagaagaggaggaaagccaacca
gcaaaaaagacctatacttggaatacaaaggaggaggcaaagcaagcatttaaagaatta
ttaaaagaaaagcgagtaccatctaatgcttcatgggaacaagctatgaaaatgatcatt
aatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgct
tacaaagtccagacagagaaagaagaaaaagaagaagcaagatcgaaatacaaagaagct
aaggaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccacaaccagatac
aaaaaagcagagcaaatgtttggagagatggaggtctggaatgcaatatcagaacgtgat
cgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggagcaagca
aagcagttacgaaagagaaattgggaagccttaaaaaacatacttgacaacatggctaat
gtaacatactctactacgtggtctgaagcacagcagtatctgatggataatccaaccttt
gcagaagatgaggaattgcagaacatggataaagaagatgcattaatttgctttgaagaa
cacatccgagctttagaaaaggaagaagaagaagaaaaacaaaagagtttgctgagggaa
aggagacgacagcgtaaaaatagagaatcttttcagatatttttagatgaactgcacgaa
catggacaactgcattctatgtcatcttggatggaattgtatccaacaattagttccgac
atcagattcactaatatgcttggtcagccgggatcaactgcacttgaccttttcaagttt
tatgttgaggatcttaaagcacgttatcatgatgagaagaagatcataaaagacatctta
aaggataaaggatttgtagttgaagtgaatactacttttgaagacttcgtggccataatc
agttcaactaaaagatcaaccacattagatgccggaaatattaagttggctttcaatagt
ttactagaaaaagcagaagcccgtgaacgtgaacgagaaaaagaggaggctcggaagatg
aaacgaaaagaatctgcgtttaagagtatgttgaaacaagctactcctccaatagaattg
gatgctgtctgggaagatatccgggagagatttgtaaaagagccagcatttgaggatata
actctagagtctgaaagaaaacgaatatttaaagattttatgcatgtgcttgagcatgaa
tgtcaacatcatcattcaaagaacaagaaacattctaaaaaatctaaaaaacatcacagg
aaacgttcccgctctagatcggggtcagattcagatgatgatgacagccactcaaagaaa
aaaagacagcgatcagagtctcggtctgcttcagaacattcttctagtgctgaatctgag
agaagttataagaagtcaaaaaaacataagaagaaaagcaagaagaggagacataaatct
gactctccagagtctgatgctgagcgagacaaggataaaaaagaaaaagaccgagaaaat
gaaaaagacagaactagacaaagatcagaatcaaaacacaaatcacctaagaaaaagact
ggaaaggattctgggaattgggatacttctggcagtgagctgagtgaaggggaattggaa
aagcgcagaaggacccttctggagcaactggatgatgatcaataa
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