Puma concolor (puma): 112849252
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Entry
112849252 CDS
T08890
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04014
Ras signaling pathway
pcoo04015
Rap1 signaling pathway
pcoo04024
cAMP signaling pathway
pcoo04517
IgSF CAM signaling
pcoo04520
Adherens junction
pcoo04530
Tight junction
pcoo04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
112849252 (AFDN)
04015 Rap1 signaling pathway
112849252 (AFDN)
04024 cAMP signaling pathway
112849252 (AFDN)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112849252 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112849252 (AFDN)
04530 Tight junction
112849252 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
112849252 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
112849252
NCBI-ProteinID:
XP_025768632
UniProt:
A0A6P6GYX7
LinkDB
All DBs
Position
Unknown
AA seq
1763 aa
AA seq
DB search
MRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RRLDVDEKPLVVQLNWNKDDREGRFVLKNENDALPPKKAQSNGPEKQEKEGVIQNFKRTL
SKKEKKEKKKREKEAVRQASEKDDRPFQGDDLENSRLAAEVYKDMPETSFTRTISNPEVV
MKRRRQQKLERRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEA
LEKYGLEKENPKDYCIARVMLPPGAQHSDENGAKETILDDDECPLQIFREWPTDRGVLVF
QLKRRPPDYVPKKTKKHVDGKLVKGKERAEGSGYGSALPPEKLPYLVELSPGRRSHFAYY
SYHTYEDGSDSRDKPKLYRLQLSVTEVGTEKFEENSIQLFGSGIQPHHCDLTNMDGVVTV
TPRSMDAETYVEGQRISETTMLQSGMKVQFGASHVFKFVDPSQDHAVAKRPVDGGLTAKG
PRQKPGIVQETTFDLGGDVHSGAALPASKSATRLDSDRALPAPSTAERGTVKPMLRLEQQ
DYRRQENRTQDALGPELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMAC
RYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFI
KQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDV
LHTLTGAMALLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQ
LGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDTPNINSTCFKLNSLQLQALL
QNYHCAPDEPFIPTDLIENVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSC
DVVRNVPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLLRENTELAQPLR
KEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVD
GRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKP
RPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPS
PGGKSTYAPGAAAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASRSQDRV
APPQNQWPNYEEKPHVHTDGHQSGPAMQRVTRSQEELREDKAYQLERHRLEAVLDRKSDS
DVWIQPSSSVGSSTSSQEHLDPCSKSGTPASTLTKSGPGRWKTPASAQPLPAAPPPAQTD
LPPPPPPPPAHYAGDFDGIPVDLPLPPPPSGQAAAERRKREEQQRWYEKEKARLEEERDR
KRREQERKLGQMRSQALNPAAFSPVAVAHTKPEKPSTLQRPQDTVIRELQPQQQPRTIER
RDLQYITVSKEELSSGDSLSPDPWKRDAREKLEKQQQMHIVDMLSREIRELQSKPERSAE
DSDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARDEERRRQR
QLDDMRRREAEDRARQEEERTKRDAEDKRRQEEGYYSRLEAERRRQHAEAERRLLEPEEP
GLGRPPLPRGYELPAPSSPAAAPPPPPQRTASSLQAPALSPDSLYTARLVAYHEEEEEED
CSLAGPNSSVGSSGAAIGARDGSRDPREKLAKSHDADLPGNSGAPENLTFKERQRLFSQG
QDVSNKVKASRKLTELENELNTK
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgagattttattttcaagataaagctgctggaaactttgcaacaaaatgcattcgggtc
tctagtacggccaccacgcaagacgtgatcgagacgctggcagagaaattccgccctgac
atgcggatgctgtcgtcccccaagtactccctctacgaagttcacgtcagcggagaagaa
agaagattggatgtagatgagaaaccccttgttgtgcagttgaattggaataaagacgat
cgagagggcaggttcgttcttaagaatgagaacgatgcccttcctcctaagaaggctcaa
agcaatggacctgaaaagcaggagaaagaaggtgttatccagaacttcaagagaactctc
tccaagaaagagaagaaggagaaaaagaagagagagaaagaggcagtgaggcaggcatct
gagaaagatgatcggcctttccaaggggatgacctcgagaattcccgactggccgccgag
gtttacaaagacatgcccgagaccagcttcactcgcacgatctccaaccccgaggtggtc
atgaagcgccggcggcagcagaagctggagaggcggatgcaggagtttcggagctcggac
gggcggccggattcaggtggaacactgagaatttatgcagatagcttaaaaccgaacatt
ccctacaagacaatcctgctgtccaccacggatcctgctgactttgctgtggccgaggct
ctagagaaatacggtctggagaaggagaaccctaaagattactgcatcgcccgggttatg
ctgcctcctggagcccagcattcggatgaaaacggtgctaaagaaacgatcctcgatgat
gacgagtgtcctttacagatcttcagggagtggccaactgaccgaggggttttagtcttt
cagttgaagaggaggccgccagactacgtcccgaagaaaacgaagaaacatgttgacggg
aagctggtgaaagggaaagagagagccgagggttccggctacggctcagcacttccgcct
gagaagttgccctacctggtggagctcagcccagggagaaggagtcactttgcctactac
agctatcacacttacgaagatggttctgactccagggacaagcccaagctttaccgcctt
cagttgagcgttactgaggtcgggacagagaagttcgaggagaactccatccagctgttt
ggatcaggaattcagccccatcactgtgacctcacaaacatggatggagttgtcaccgtg
actccgagaagcatggacgccgagacgtacgtggaaggacagcgtatctccgagacaacc
atgctgcagagtgggatgaaagtgcagtttggggcgtcacacgtgttcaagtttgtggac
cccagccaggaccacgcagtggccaagagacccgtggatggaggcctgacggccaagggc
cccagacagaagcctggaattgttcaggagacaactttcgatttggggggagatgttcac
agcggggcagcgctgccagcgagcaagagcgccaccaggctggacagcgacagggcactg
cctgcccccagcacggccgagcgcgggacagtgaagccgatgctgagactggagcagcag
gactaccgccggcaagaaaacagaactcaggatgctcttgggcctgaactcatactgcct
gcaagcattgaattcagggaaagttctgaagattcatttttatctgccattataaattat
actaatagctctacagtccattttaagttgtcacctacatatgtattatatatggcatgt
cggtatgtattgtcgagccagtacagacccgatgtcagtcctacagagcgtactcacaaa
gtgattgccatagtcaacaagatggtgagcatgatggagggggtgattcagaaacagaag
aatatcgcaggggcacttgctttctggatggccaatgcatctgagcttctcaacttcatt
aagcaggaccgagatcttagtcgaatcacattggacgcccaagatgttttagcacacttg
gttcaaatggcgtttaaatatctggttcattgtcttcagtcagaactgaataactacatg
ccggcttttctggatgaccctgaagagaacagtctacaaagaccaaaaatagatgacgtc
ttgcacacgctcacgggagcgatggcactgctgaggcgctgcagggtcaatgctgctctg
accatccagcttttctctcagctcttccacttcatcaacatgtggctcttcaacagattg
gtgaccgaccccgagtcgggactgtgctctcactattggggggcgatcatccgccagcag
ctggggcacgtggaagcctgggcagagaagcagggattagagctggcggccgactgtcac
ctgagccggatagtgcaggcgaccactttgctcaccatggataaatacgctcctgaggac
accccaaatatcaacagcacctgctttaagttaaattcactgcagctgcaggccttgcta
cagaattaccactgtgcgcccgatgagccctttatccccacggacctgatagagaatgtc
gtggccgtggccgaaaacacggccgacgagctggcacgcagtgatgggcgggaggtgcag
ctggaagaggaccctgatctgcagctgccttttcttttgccggaagacggctattcttgt
gacgtcgtcaggaacgttccaaacggtttacaagaatttctggaccctctgtgccagaga
gggttttgcaggttaattcctcatgcacgttcaccaggtacttggacgatatattttgaa
ggtgcagattatgagagccatcttctgcgtgagaacacagagctggctcagcctctgcgg
aaagaacctgaaataatcactgtgactctcaaaaagcaaaacggaatgggcctcagcatt
gtcgcggcaaagggtgctggtcaagataaacttggaatctatgtcaagtctgtcgtaaaa
ggaggtgctgcagatgtggatgggcgcctggccgcaggtgaccagctcctcagtgtggat
ggacgaagtctggtaggactctctcaggaaagggcagcagaactcatgacaaggaccagt
tccgtggtgacactggaagtagccaagcaaggagcgatctaccacggcctggccaccctg
ctcaatcagccgtccccgatgatgcagagagtttcagaccgtcgtggctcaggtaaaccc
cgaccaaagagcgaaggtttcgagctctataacaattcagctcaaaacgggtcacccgag
agccctcagctgccttgggcagaatacagcgaaccgaagaagctccctggcgatgacagg
ctgatgaagaaccgggctgaccaccgctccagccccaacgtggcaaatcagccccccagt
cccggagggaaaagcacgtacgcccctggagcagccgctaagatcacgtccgtctccacc
ggaaacctctgcactgaggagcagacccctccacctcgacctgaggcctaccccatcccc
acccagacgtacaccagggagtacttcaccttcccggcctccaggtcccaggaccgcgtg
gctccccctcagaaccagtggcccaattacgaggagaagccgcacgtgcacacagatggt
catcagtccggccccgcgatgcagcgcgtcacccgctcccaggaggaacttcgggaggat
aaagcttaccaactcgagcggcatcggctggaggcggtgctggatcgcaagtccgacagt
gacgtgtggatccagccgagctcctcggtgggctccagcacgtccagccaggagcacctg
gacccctgctccaagtcgggcacccccgcctccacgctgaccaagagcggccccgggcgc
tggaagacgccagcctccgcgcagcccctgccagcggcccccccgcctgcgcagacagac
ctgcccccgccgcccccaccgccccccgcgcactacgccggagacttcgacgggatcccc
gtggacctgcccctcccgccccctcccagcggccaggcggcggcggagcggagaaaacgg
gaggagcagcagcgctggtacgagaaggagaaggcccgcctggaggaggagcgggacagg
aagcgccgggagcaggagcggaagctgggccagatgcgctcccaggccctgaacccggcc
gcgttctccccagtggccgtcgcgcacacgaagccggagaaaccttccacgctccagagg
ccccaggacacggtcatccgggagctgcagccccagcagcagccacgcaccatcgagcgc
cgagacttgcagtacatcacggtcagcaaagaggagctgtcctcgggggacagcctgtcc
cccgacccctggaagcgggatgccagggagaagctggagaagcagcagcaaatgcacatc
gtggacatgctgagcagggagatccgggagctccagagcaagcccgagcgcagcgccgag
gacagcgaccgcctgcgcaagctcatgctggagtggcagttccagaagagactgcaggag
tccaagcagaaggacgaggacgacgaggaggaggaggacgacgacgtggacaccatgctg
atcatgcagcgcctcgaggctgagcggagagcaagggacgaggagcggcggcggcagcgg
cagctggacgacatgcgcaggcgggaagcggaggaccgcgccaggcaggaggaggagagg
acgaagcgagacgccgaagacaagaggcgacaggaagaaggttattacagccgcctggaa
gccgagaggcgcagacagcacgcggaggccgagcgcaggctgctggagccggaggagccg
ggcctgggcagaccgccgctgccgcggggctacgagctcccggccccgtcctccccggcg
gctgctcctcctcccccacctcagcggaccgcctcctccctgcaggccccggccctgtcc
ccagactccctgtacaccgccaggctcgttgcgtaccacgaggaggaggaggaggaggac
tgcagtctggcaggaccaaactcttccgtgggatcttccggggcagcgatcggtgcccgt
gacggctcccgggacccgagagagaagctggcgaaaagccatgatgcagatttacctgga
aattccggagcccctgagaacttgacattcaaagagcgccagcggctgttctcacaaggt
caagatgtgtccaataaagtgaaagcctctcgtaaattaacagaactggaaaacgaactg
aacacaaagtga
DBGET
integrated database retrieval system