Puma concolor (puma): 112849521
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Entry
112849521 CDS
T08890
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcoo04040
]
112849521 (SCN11A)
Ion channels [BR:
pcoo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112849521 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
112849521
NCBI-ProteinID:
XP_025768943
UniProt:
A0A6P6H026
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKKCKDQTPAEPQPRPQLDLKVSR
KLPKLYGNIPHELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSANRALFIFGPFNPIRS
LAIRISVHSLFSMFIICTVIINCVFMATACGKDNSNIYTDNAEYVFTGIYIFEALIKILA
RGFVLDEFSFLRDPWNWLDSIVIATAFVSYSPSIRASGISLSSLRTFRVFRALKAISVVS
GLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFKENLNQRCVRKDCKDMDNLDDH
CFEKKDSTEFRICGSWMGESACSEQFQCNHTKRNPDYNYTNFDNFGWSFLSMFRLITQDS
WEKLYQQTLRTSGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKM
FQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNRKRKSFFLRDSGKDQPP
ESDSDEDSTKKPHILEQTKRLSQNLSVDFCDEHGDPFQRQRALSAVSILTITMQEQEKSQ
EPCLPCGGNVASRYLVWNCSPQWLCVKKALRVVMTDPFTELVITICIVINTVFLALEHYK
MDQSFEYMLYTGNLVFTGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFADVMNSV
VVGKQSPLFFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVG
MQLFGSKFNSVRNNTKSCGPTVPCLRRWHMGDFYRSFLVVFRILCGEWIENMWECMQETS
KPLCVVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGSLDGEAKKTKVQLALDRFHRAF
CFVIHTLARFCHTWCRRQTLPQQKEVSGGPPAKSKDIIPLVAGVKRGSETWEEFGVVTSA
PKTLSVEHDRTWLAPLAEEEDDFESSGKINAQCVAPPEAGKQAYELPQETKTSTSPGAQS
VEIDVFSEGDIYLSAQNPRKKSDTTSVFSECSTIDPQDPFARVPEMVPKKEPERCFPKGL
GHCFPCCATDKRKSHWIIWWNLRKTCYQIVKHSWFESFVIFVILLSSGALVFEDIHLEKR
PNIQALLNCTDHIFTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLKSL
KSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGK
FGRCINVSDTNSVINYSVVANQSQCESGNFSWVTPPVNFDNVGMAYLALLQVATFKGWMD
IMYAAVDSRGKELQPGFEENPQNYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKISGE
DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLAFDLVTNQVFDVIIIILIFLNMV
IMMAESNNHPEDTKAILEDLNLAFVVIFTIECLIKIFALRQYYFTNGWNLFDCVIVVLSI
VSAMVSALENQQHIPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIG
LLLFLVMFIYAIFGMNCFCKVKEGFGIDDIFNFKTFVGSILCLFQITTSAGWDALLRPML
QSNDSCNPNLDSRHLPAIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGED
DFEIFYEVWEKFDPEATQFIKYPALSDFADALPEPLRVAKPNRFQFLMMDLPMVSGDRLH
CLDILFAFTTRVLGDSSGLDSMKAMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAVIQ
KAFRKYKLKMSMCALEDGPRSPLQTLCNGDLSSSGVAEGKVHYD
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccggtgatcttcccagatgaacgaaatttccgtcccttcact
tcggacaccctggctacaattgagaagcggattgccatccaaaaggagaaaaagaagtgc
aaagaccagacaccagcagaaccccagcctcggcctcagcttgacctaaaggtctccagg
aagttgcccaaactctatggcaacattccccatgagctgatagcaaggcccctggaagac
ttggacccgttctacagaaatcataagacgtttatggtgttgaacaaaaagaggaccatc
tatcgcttcagtgccaatcgtgccttgttcatatttgggcctttcaatccaatccgaagt
ttggccattaggatctcagtccattcattgtttagcatgttcatcatctgcaccgtcatc
atcaactgcgtgttcatggccaccgcctgtgggaaggacaacagcaacatatataccgac
aatgccgagtatgtcttcactgggatttatatttttgaagctttgataaaaatattggca
agaggttttgttctggatgagttttcttttcttcgagatccatggaactggctggactcc
attgtcattgcaacagcgtttgtatcatactcaccaagtatcagggccagtggcatcagt
ctgtcgtccctacgtacctttcgggtgttcagagctttgaaagcaatttcggtggtttca
ggtctgaaggtcatcgttggggccttgctgcgctctgtgaagaagcttgttgacgtgatg
atcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctctttaaggaa
aatctgaaccagagatgtgtcaggaaggactgtaaagatatggataaccttgacgaccat
tgctttgaaaagaaagattccactgaattcagaatatgtggcagctggatgggtgaaagt
gcctgttctgaacaatttcagtgcaaccacaccaaaaggaatcctgactataattatacc
aattttgacaactttggctggtcttttctgtccatgtttcggctgataacccaagattcc
tgggagaagctttatcaacagaccttgcgtacctcagggcttttctcagtcttcttcttc
gtggtggtcatcttcctgggctccttctacctgattaacttaaccctggctgttgtcacc
atggcttacgaggagcagaacagaaacgtagctgccgagaccgaggccaaggagaagatg
ttccaggaagcccagcggctgctgaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttaattcccttgaggcatcatctttttccccaaagaagagaaagcta
tttggtaataggaaacgaaagtccttttttttgagggactctgggaaagaccagcctcca
gaatcagattctgatgaagattccacgaaaaagccacacatcctagagcaaaccaaacgg
ctgtcccagaatctgtcagtggatttctgtgatgagcacggggaccccttccaaaggcag
agggccctgagtgccgtcagcatcctcaccatcaccatgcaggagcaagaaaaatcacag
gagccttgcctcccgtgtgggggaaacgtggcgtccagatacctcgtgtggaactgcagc
ccccagtggctgtgcgttaagaaggccctgcgagtcgtgatgaccgacccctttactgag
ctggtcatcaccatctgcatcgtaatcaacactgtcttcttggccttggagcattacaaa
atggaccagagttttgagtatatgttgtatacagggaatttggttttcactggcattttc
atggcagagatgtgcctaaaaatcatcgcgctcgatccctacaactacttccgccgaggc
tggaacatttttgacagcatcgtcgctcttctgagttttgcagatgtgatgaacagtgta
gttgtaggaaaacaaagtcctctgtttttccattccttaagagtgctaagggttttcaag
ttagccaaatcctggccgactttaaacacactgataaagataattggtcactccgtcgga
gccctgggaaacctgaccgtggtcctggccattgtggtcttcattttctcagtagttggc
atgcagctttttggctctaaattcaattctgtaaggaataacaccaaatcctgtggccct
acagtcccatgtttacgacgctggcacatgggggacttctaccgttcctttctggtggta
ttccgcatcctctgtggggaatggatcgaaaacatgtgggaatgtatgcaagaaactagt
aaaccactgtgcgtcgtcgtctttctgttgatcatggtgataggaaaactcgtggtactc
aacctcttcattgccttgctgctcaattccttcagtaatgaggagagggatggaagcttg
gatggagaggccaaaaaaaccaaagtccagttagccctggatcggttccaccgggctttt
tgctttgtaatccatactcttgcgcgtttttgtcacacgtggtgcaggaggcaaacgtta
ccgcagcaaaaagaggtgtcgggaggccctcctgccaaaagcaaagacatcattccgctg
gtcgcaggggtgaaaaggggctcggagacctgggaggagttcggtgtagtcacgtctgca
ccaaagaccttgagtgtagagcatgaccggacttggttggccccacttgcagaggaagag
gatgattttgaatcttctggcaaaatcaatgcacagtgcgttgcaccccctgaggctggc
aaacaggcctatgaactccctcaggagaccaagacgtctaccagcccaggagctcaaagt
gtggaaattgatgtgttctctgaaggtgacatttatctgtcagcacagaacccccgaaag
aagtctgatactaccagtgttttctcagaatgtagcaccattgatccacaggatcctttt
gcaagggtaccggaaatggttcccaaaaaagaaccagagagatgttttcccaaaggcctg
ggtcactgcttcccatgctgtgccacggacaagagaaagtcccactggatcatttggtgg
aacctgcggaaaacctgctaccaaatagtgaaacacagttggtttgagagctttgttatc
tttgtgattctgctgagcagtggggcactggtatttgaagatattcaccttgagaaacga
cccaatatccaagcattacttaattgtactgaccatattttcacatacatttttatcctg
gagatgggtctaaaatgggtagcctttggatttgggaagtatttcaccagtgtctggtgc
tggcttgacttcatcattgtaattgtctctgtgaccagtctcatcgacctaaagagcttg
aagtccttcaggactctacgagcactgaggcccctgcgcgcactgtcccagtttgaagga
atgaaggtggtcgtcaatgctctcataggtgccatacctgccattctgaatgttttgctt
gtctgcctcattttctggctcatattttgtatcctgggagtaaacttcttctctggaaaa
tttggaagatgcattaatgtatcagatacaaactcagttataaattacagcgttgttgca
aaccaaagtcaatgcgaaagtggaaatttctcttgggtcaccccgccggtcaactttgac
aatgtgggaatggcttaccttgccctcttgcaagtggcaacatttaagggctggatggat
atcatgtatgcagctgtcgactccagagggaaagaactacagccagggtttgaggagaac
ccacaaaactaccttttcttcgtggcttttatcatctttggctcattctttactctgaat
ctcttcatcggtgttattattgacaacttcaaccaacagcagaaaaagataagtggtgaa
gatatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaattaggatcc
aaaaaacctcaaaagcccattccgaggcctctgaataaatgccagggtctcgcgttcgac
ctggtcacaaaccaggtctttgacgtcatcatcatcatcctcattttcctcaacatggtt
atcatgatggctgaatcaaataaccatcccgaagacacaaaagccatccttgaggatctc
aacctggcctttgtggtcatctttacaattgagtgtctcatcaaaatctttgctttgagg
caatactacttcaccaatggctggaacttattcgactgtgtgatcgtggttctctctatt
gttagtgccatggtttctgccttggagaaccagcagcacattcccttccctccaacgctc
ttcagagttgtgcgcttggctcggattggtcggatcctgagacttgttcgggcagcacga
ggaattagaaccctcctttttgctctgatgatgtcccttccctctctattcaacatcggt
cttctgctttttctggttatgtttatctatgccatttttggtatgaactgcttttgcaaa
gtgaaggaagggtttggaattgatgacatattcaacttcaagacttttgttggcagcata
ctctgtctcttccagatcaccacctcggcaggctgggatgccctcctcaggcccatgctg
caatcaaatgattcatgcaaccccaacttagacagccgtcacctccctgccatagccata
gcctactttgttagttacatcatcatttccttcctcattgttgtcaacatgtacattgct
gtgatcttagagaacttcaatactgccactgaagaaagtgaggaccctttgggtgaagat
gactttgaaatattctatgaagtctgggaaaagtttgacccagaagcaacacagtttatc
aagtatcctgccctttctgactttgccgatgcccttcctgagcctttacgggtggcaaag
ccaaatagatttcagttcctaatgatggacttgcccatggtgagtggagatcgcctccac
tgcctggatattctcttcgcgttcaccactagggtacttggtgactccagcggcctggac
agcatgaaagcaatgatggaggagaagttcatggaggccaacccttccaagaagttgtat
gaacccatagtcaccaccaccaagaggaaggaagaggaaagatgtgctgctgttattcaa
aaggcctttcgaaaatacaagctgaagatgtccatgtgtgccttagaagacgggcctcgt
tcaccactccagacactctgcaatggagacctctccagctccggggtggccgagggcaag
gtccactacgactga
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integrated database retrieval system
