Puma concolor (puma): 112849765
Help
Entry
112849765 CDS
T08890
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoo03021
]
112849765 (SCAF4)
03041 Spliceosome [BR:
pcoo03041
]
112849765 (SCAF4)
Transcription machinery [BR:
pcoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112849765 (SCAF4)
Spliceosome [BR:
pcoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
112849765 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112849765
NCBI-ProteinID:
XP_025769254
UniProt:
A0A6P6H0Q1
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MEEDATPLSLKMEEETLFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKC
KPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVL
NLWQKNGVFKIEIIQPLLDMAAGTSNAAPVPENVTNNEGSPPPPVKVSSEPPQATTNSVP
SVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLK
TAPAQPPEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDAAAAAAAAAAAAAA
AVTAPAVAVAPAPAAATPAATPAASPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMTIQ
QDPVHHQVPLPPNGQMPGFGLLPTPPFPPMAQSVIPPTPPVQQPFQTSFQAQNEPLTQKT
HQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRR
RHSPRSRSQERRDREKERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEE
FGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYK
QYWDVELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGAETS
HTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPG
FGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAG
INEDTTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLG
TQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGP
PPGPGGFGMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQPQPQQPP
PPQPQPQQPPPAQQPPPAQQQPQPFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGN
RNDDRDNSNRERREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEENRGK
EKPEVTDRAGGNKTVEPPGSQVGDVDTVSELDKGESESAVVKSSEELPAEATSSVEPEKD
SGSAAEAPR
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatgccaccccgttgtctttgaagatggaggaggagaccctcttttcactt
atggatatgaaacctcccatctctcgagccaagatgattcttatcactaaagctgctatt
aaagccattaagctttataagcatgtagttcaaatagtagaaaagttcatcaaaaagtgt
aaaccagagtacaaggttccaggattatatgtaattgactcaattgtgcgacagtctcgt
catcagtttggaactgataaagatgtttttgggccaagattctctaaaaacataactgcc
acattccaatatttatatctttgtccatctgaagataagagtaaaatagttcgcgtgctg
aacctttggcaaaaaaatggagtattcaaaattgaaattattcagcctcttttggacatg
gcagcaggaactagtaatgccgctccagtaccagaaaatgttactaataatgaaggctca
cctccacctccagttaaagtttcttctgaacccccccaagccactacaaactctgtacca
tctgtaccacagttgcctagctctgatgcttttgctgctgtggcccaactgtttcagaca
actcaaggtcaacagcttcagcagatccttcagacttttcagcaacctccaaaaccacag
tctcccgccattgacaatgctgtgatggcgcaggtccaggctatcacggctcagttaaag
acggctcctgcacagccacctgaacaaaaagctgctttccccccgcctgagcaaaaaact
gcatttgacaagaagcttcttgatagatttgattatgatgatgagccagaagctgtggaa
gaatcaaagaaagaagatgctgctgccgccgcagccgccgctgctgccgccgccgccgcc
gccgtcacggcacctgctgtggctgttgcaccagcacctgctgctgccacaccggctgcc
acgcctgccgcttcccctcctcaggcaccctttgggtttcctggagatggcatgcagcag
ccagcatatacacaacatcaaaacatggatcagtttcagcctcgaatgatgacaatacag
caggatccagtgcaccatcaggttccacttcctcctaatggacagatgccaggttttggc
cttcttcctacacctccatttcctcccatggctcagtctgtgattcctccaactccaccc
gtgcagcagcctttccaaacttcttttcaggctcaaaatgaaccacttacacagaagaca
catcaggaaatggaagtagaacaaccttgtatccaagaggttaagcgacacatgtctgat
aacagaaagtcaagatctaggtcagcatccaggtcaccaaaaagaaggcgatctcgatct
ggctctagatcgcgaaggtcccgtcatcgacgttctcgttctcggtccagagatcgacgc
cgacattcgcctagatctcggtcccaagaaaggcgagatcgagaaaaagaaagagaacgc
cgacaaaaaggccttcctcaaatcaaaccagaaactgcaagtgtttgtagcactacactc
tgggtgggacagctggacaaacggactactcagcaagatgttgcaagtctcttagaagag
tttggtccaattgaatcaattaatatgatacctcccagaggttgtgcctatattgttatg
gttcataggcaagatgcttatcgcgccctgcagaaactgagccgcggaaactataaagtg
aaccagaaatccataaagattgcctgggctttaaacaaaggaataaaggcagattataag
cagtattgggatgtagaactgggagttacttatattccatgggacaaagtcaagcctgaa
gaactggagagtttttgtgaaggaggaatgttggacagtgatacacttaatccagattgg
aaaggaatccccaagaagcatgaaaatgaagttgctcaaaatggaggggcagaaacctca
catacagaaccagtatcacctatacctaaacctttaccagtgcctgtccctcctattcct
gtgcccgcacctataacagtgccacctccacaggtcccaccacatcagccgggtcctcct
gtagttggtgctctccagccacccactttcacgcctcccttgggcattcctcctccgggt
tttggtcctggtgttcctcctccacctcctcctccaccatttttgcgcccaggatttaat
ccgatgcatctgccaccaggttttcttcctcctggacccccacctcctataactccacca
gtatccattcctcctcctcacactccaccaataagcatcccaaactctactatcgctggt
ataaatgaagacactacaaaagacttatctattggaaatcccattccaacagtggtgtct
ggggctagaggaaacgccgagtctggtgacagtgtgaaaatgtatggctctgctgtgcca
cctgctgcacccacgaatctgcccacccctcctgtaacgcagcctgtttcacttcttggt
actcaaggagttgcacctggtcctgtaattgggctccaagcaccatccactggtctcctt
ggtgcccgacctggcctaatcccacttcagcgccctccaggaatgcctccacctcattta
cagcgatttcctttgatgccacctcgtcccatgccaccgcacatgatgcatagaggtcca
ccgccaggccccgggggctttggaatgcctccacctcatggaatgaaaggcccctttcca
ccgcatggcccctttgttaggcctgggggaatgccagggcttgggggcccggggccaggc
ccagggggtcccgaagacagagacgggaggcagcaacagccacagccacagcagccgcca
ccgccacagccacagccacagcagccgccaccagctcagcagccgccaccggctcagcag
caaccacaaccgtttagaaacgataacaggcagcagttcaattcaggtagagaccaagag
aggtttggaagaagatcttttggaaatagggtggaaaatgaccgggaacggtatgggaac
cgtaatgatgatagagataatagcaatcgtgaaaggagagagtggggaagaaggagccct
gaccgggacaggcacagagacttggaagagagaaatagacgctctagtgggcatcgagac
agagagagagattctagagatagagagtctcgtagagagaaggaagaaaaccgaggaaag
gagaagcctgaggtgacagacagggcaggtggtaacaaaaccgttgaacctcccggtagc
caagtgggagacgtagacactgtttcagaacttgataagggggagtctgagtctgcagtt
gtaaaatcttctgaagagttacctgctgaggctacctcatccgttgaacccgaaaaggat
tctggctcagcagcagaggctcctcgttag
DBGET
integrated database retrieval system
