Puma concolor (puma): 112849810
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Entry
112849810 CDS
T08890
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04360
Axon guidance
pcoo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112849810 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
112849810 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcoo04515
]
112849810 (ROBO1)
Cell adhesion molecules [BR:
pcoo04515
]
Immunoglobulin superfamily
ROBO family
112849810 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
DUF7908
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
112849810
NCBI-ProteinID:
XP_025769283
UniProt:
A0A6P6H142
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MATTVTTVTPSAALVLFPTDPEDLERGNDNGTPVPTSDNDDNSLGYTGSRLRQEDFPPRI
VEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFL
RIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVME
CQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERE
SEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIR
DDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRT
VTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSTSRFSVSQTGDLTITNVQRSDVGYYI
CQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATGSPAPTIL
WRKDGVLVSTQDSRIKQLETGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGV
PVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSW
QTVAENVKAETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQVEQRKWDEPLSV
GRLEVDQQSQYIQGYKILYRPSGANHGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKAR
PFFNEFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQAPPEDTQNGMVQE
YKVWCLGNETRYHINKTVDGSTFSVVIPSLVPGIRYSIEVAASTGAGAGVKSEPQFIQLD
SHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTY
AGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNIGEPATQPWLADTWPNTGNSHNDCSI
TCCTAANGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKT
FNSPNLKDGRFVNPSGQPTPYATTQLIQSNLSNNMNNGSGDPSEKHWKPPGQQKQEVAPI
QYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTP
KVPKQGGMNWADLLPPPPAHPPPHSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEE
EEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRR
RQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLE
QTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAE
YAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVIQKARPAKKQKHQPGHLR
REAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMAPKLPSIEARTDRSSDRKVGSYKGR
EVLDGRQVADMRTNPGDTREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTF
PTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYERGEDNNEELEKVLPR
LLLQTPKTLHDQRRVSPSSGLLPAAPRNIRRAVLLPTPRDCRREPAAPEKVGDFYCSGLL
KFTVGKYKQSVIANPASSLVLFPDIENAPQNENTANQV
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggcaactactgttactactgtgaccccatcagcagctctggtgttgtttccgacagac
cctgaagacctagagagggggaacgacaacgggacgcccgtccccacctctgataatgat
gacaattcgctgggctacacaggctcccgtcttcgtcaggaagattttccacctcgcatt
gttgaacacccttcggacctaattgtgtcaaaaggagaacctgcaactttgaactgtaaa
gctgaaggccgccccacacccactatcgaatggtacaaagggggggagagagtggagacg
gacaaagatgaccctcgatcacaccgaatgttgctgccaagtggatctttatttttctta
cgtatagtacatggacgaaaaagcaggcctgatgaaggggtctacgtctgtgtagcaagg
aattacctcggagaggccgtgagccataatgcatcgctggaggtggctatactccgggat
gacttcagacaaaatccttccgatgtcatggtggcagtgggggagcctgcagtgatggaa
tgccagcctccacgaggacatcctgaacccaccatttcatggaagaaagatggctctcct
ctggatgataaagatgaacgaataactattcgaggaggaaagctcatgatcacttacacc
cgcaaaagtgatgctggcaaatacgtttgtgttggtaccaacatggttggggaacgggag
agtgaagtggctgagctaacggttttggagagaccatcgtttgtaaagagacctagtaac
ttggcggtaactgtggacgacagtgcggaatttaaatgtgaggcccgaggtgaccctgtg
cctacggtacgatggaggaaagatgatggagaactgcccaaatccagatatgaaatcaga
gatgatcataccttgaaaattcggaaggtgatggctggtgacatggggtcatatacttgt
gttgcagaaaatatggttggaaaagcagaagcatcagctactctgactgttcaagttggg
tctgaacctccacattttgttgtgaaaccccgtgaccaggttgttgctttggggcgaact
gtaacttttcagtgtgaagcaactggaaatcctcaaccagctattttttggagacgagag
gggagtcagaatctgcttttctcatatcagccaccacagtcaaccagccgtttttcagtc
tcccagactggtgatctcactatcactaacgtccagcgatctgatgttggttattatatc
tgccagactttaaatgttgctggaagtatcatcacaaaagcatatttggaagtaactgat
gtgattgcagaccggcctcccccggtcattcgacaaggtcctgtgaatcagactgtggcc
gtggatggtactttagtgctcagctgtgtggccacaggcagtccagcacccacgattctt
tggagaaaggatggagtgcttgtttcaacccaagattctcgaatcaaacagctggagaca
ggagtgctgcagatccgatatgctaagctgggtgacacaggtcggtacacctgcattgca
tcaacccccagtggtgaggcaacatggagtgcttacattgaagtccaagaatttggagtt
ccagttcagcctccaagacccactgacccaaatttaatccctagtgccccctcaaaacct
gaagttacagatgtcagcagaaatacggtaaccttgtcatggcaaccaaatttgaattca
ggtgcaactccaacatcttacattatagaagccttcagccacgcatctggtagcagctgg
cagactgtagcagagaatgtgaaagcggaaacattcgccattaaaggactaaaacctaat
gcaatttaccttttccttgtgagagcagcaaatgcatatggaattagtgatccaagccag
atatcagatccagtgaaaacgcaagtggagcaacgtaagtgggatgaacccctgtcagtg
ggaagactggaggtggaccaacaatctcagtatattcaaggatataaaattctttatcgg
ccatcaggagccaaccatggtgaatcggagtggttagtttttgaagtgaggaccccaacc
aaaaatagcgtggttatccctgatctcaaaaagggagtcaactatgaaattaaggctcgt
cctttttttaatgaatttcaaggagcagatagtgaaattaagttcgcaaagaccttagaa
gaagcacccagtgccccaccccaaagtgtaactgtgtcaaagaatgatggaaatggaact
gcaattcttgttagttggcaggcgcctccagaagacactcaaaacggaatggtccaagag
tataaggtttggtgtctgggcaatgaaactagatatcatataaacaagacagtagatggt
tccaccttttctgtggtcatcccttctctggttcctgggatccggtacagcatagaggtg
gcagccagcactggggccggggctggggtgaagagtgagccacagttcatccagttagat
tctcatggaaaccctgtgtcgcctgaagaccaggtcagccttgctcagcagatctccgat
gtggtgaagcagccagcgttcattgccggaatcggggcagcctgctggatcatcctcatg
gtgtttagcatctggctctatcgacaccgcaagaagagaaacgggctgactagtacttac
gcgggtatcagaaaagtcccgtcttttaccttcacaccaacagtaacttatcagagaggc
ggtgaagctgtaagcagtggagggaggccaggacttctgaacatcggtgaacctgccaca
cagccatggctggccgacacatggcctaatactggcaacagtcacaatgactgctccatc
acttgctgcactgcagccaatggtaacagtgatagcaacctgaccacctacagtcgccca
gctgattgtatagcaaattataacaaccaactggataacaaacaaacaaatctgatgctc
cctgagtcaactgtttatggtgatgtggaccttagtaacaaaatcaatgagatgaaaacc
ttcaatagcccaaatctgaaggacgggcgttttgtcaatccatcagggcagcccactcct
tacgccaccacccagctcatccagtccaacctcagcaacaacatgaacaatggcagtggg
gaccccagcgagaagcactggaagccacccggacagcagaaacaggaagtggcaccaatc
cagtataacatcatggagcaaaacaaactgaacaaagattatcgagcaaatgacacaatt
cctccaactatcccatacaaccagtcatacgaccagaatacaggaggatcttacaacagt
tcagaccggggcagtagtacatctgggagtcaagggcacaagaaaggggcacggacaccc
aaagttccaaaacagggtggcatgaactgggcagacctgcttcctcctcccccagcacat
cctccacctcacagcaatagtgaagagtacagcatttctgtagatgaaagttatgaccaa
gaaatgccatgtcccgtgccaccagccaggatgtatttgcaacaggacgaactggaagag
gaggaagatgaacgaggccccaccccccctgtacggggagcagcttcttctccagctgct
gtgtcttacagccatcagtccactgcgacactgaccccgtctccacaagaagaactccag
cccatgttacaggattgcccggaggagattggccacatgcagcaccaacccgataggaga
cggcagcctgtgagtccccctccaccaccacgaccgatttccccaccacatacctatggc
tacatttcaggacctcttgtctcagatatggatacggatgctccagaagaggaagaagat
gaagcagacatggaagtggccaagatgcagaccagacggcttttgttacgtgggcttgag
cagacccctgcctccagtgtaggggacctcgagagctctgtcactgggtccatgatcaat
ggctggggctcagcctcagaggaggacaacatttccagtggacgctccagtgttagttct
tccgacggctccttcttcaccgatgctgattttgcccaggcagtggcggcagcagcagag
tatgctggcctcaaagtggcacgtcgccaaatgcaggatgccgctggccgccgacatttt
catgcatcccagtgcccaagacccacaagtcctgtttctacagacagcaacatgagtgct
gcggtaatacagaaggccagaccagccaagaagcaaaaacaccagccaggacatctgcgc
agagaagcctacacagatgatcttccacctcctccggtgccaccacctgctataaagtca
cccactgtccaatccaaggcacagctggaggtacgacctgtaatggcacccaaactacct
tctatagaagcaagaacagacagatcatcagatagaaaagtaggcagctacaaggggaga
gaagtattggatggaagacaagttgcagatatgagaacaaatccaggtgataccagagaa
gcacaggagcagcaaaatgatgggaaaggacgaggaaacaaggcagcaaaacgcgacctt
ccaccagcaaagactcatctcatccaagaggatattctaccttactgtagacctactttt
ccgacatcaaataatcccagagatcctagttcttcaagctcaatgtcatcaagaggatca
ggaagcagacaaagagaacaagcaaatgtaggtcgaagaaatattgcagaaatgcaggtt
cttggaggatatgaaagaggagaagataataatgaagaattagagaaagtgctgccgagg
ctgctcttgcagactcctaaaactctacatgatcagaggagggtctcaccaagcagtggc
cttctgccggctgcacccaggaacattcgcagggctgtgctgctgcctacacccagagac
tgcaggcgggagccagctgcccctgaaaaagttggtgacttctattgctcaggtttgctg
aaattcacagtaggaaaatataaacagagtgtgattgctaatccagcttcaagtctagtg
ctctttccagacattgaaaatgctcctcagaatgagaacacagctaatcaagtttag
DBGET
integrated database retrieval system
