Puma concolor (puma): 112850176
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Entry
112850176 CDS
T08890
Symbol
NPHP3
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-3
KO
K19360
nephrocystin-3
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcoo03037
]
112850176 (NPHP3)
Cilium and associated proteins [BR:
pcoo03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
112850176 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
NPHP3_N
TPR_3
TPR_11
AAA_16
KAP_NTPase
NACHT
AAA_22
DUF2225
AAA_14
AAA_19
T2SSE
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
112850176
NCBI-ProteinID:
XP_025769578
UniProt:
A0A6P6H208
LinkDB
All DBs
Position
Unknown
AA seq
1331 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGAGGGEAYEIPVXVKPKARLLRSSFRRGAAAAAAGAGPGS
LPRGAGGGSGLGPSFKSTGSSVPELEYAAAEYERLKKEYEIFRVSKNQELLSMGRREAKL
DTENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETK
ENEIQDLLRAKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAAGTQCEYWTGGALGS
EPSIGSMIQLQQSFRGPEFAHSSIDVEGPFANVNRDDWDVAVASLLQVTPLFSHSLWSNT
VRCYLIYTDETQPEVDLFLKDYSPKLKRMCETMGYFFHAIYFPIDLENQYLAVRKWEIEK
SSLVILFIHLTLPSLLLEDCEEAFLKNPEGKPRLIYHRLEDGKVSSNSIQQLIDQVSNLN
KTNKAKIIDHSGDPPEGVYKIYIYVEKIIKQDILGFENTDMETKDLGSEDSIPEEDDFGD
VLWDIHDEQEQMETFQQASNSAHELGFDKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLL
LSKWIQLQQKNSPNTLILSHFVGRPMSTSSEPSLIIKRLTLKLMQHSWSVSALTLDPAKL
LEEFPRWLEKLSARHQGSIIIIIDSIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETCPP
AWRLWPTLHLDPLNPKDAKSIIIAECHSMDIKLSKEQEKKLERHCRSATTCNALYVTLFG
KVMARAGRAGNLDKILHQCFQCQDTISLYRLALRSIQESLANDMDKELMKQILCLINVSH
NGVSESELMELYPELSWAVLTSLIHSLHKMCLLTYGCGLLKFQHLQAWETVRLEYMEDPT
IISSYRQKLINYFTMQLSRDRVTWRSADELPWLFQQQGSKQKLHDCLLNLFVSQNLYKRG
HFAELLSYWQFVGKDKSAMAAEYFDSLKQHEKNWEGEENMICLADLYETLGRFLRDLGLL
SQAVVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEIAENAY
GAEHPHIARELEALATLYQKQNKYEQAEHFRKKSFKIRQKATRRKGNSYGFALLRRRALQ
LEELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLN
NLAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKLDKAVPL
YELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHIEALPLYERALKIYEDSLGRMHPR
VGETLKNLAVLSYEEGDFEKAAELYKRAMEIKEAETSLLGGKAPSRHSSSGDTFSLKTTH
SPNVFLHQGPR
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcctcgtcgcttgtgagccccgctggcggggaagtgatagaggacacgtat
ggggcgggcggcggcgaggcctacgagatcccggtgnnggtgaagcccaaggcccgcctg
ctgcgcagctcgttccgccgcggcgctgcagcagcggcggcaggggccgggcccgggtcg
ctgccccgtggagcgggcggcggcagcggactgggccccagcttcaagtctaccggctcg
tccgtgccggagctggagtacgcggcggccgagtacgagcggctgaagaaggaatacgag
atcttccgggtcagcaagaatcaggaattgttgtctatgggccgccgcgaggccaagctg
gacacggagaacaagcggctgcgggcggagctgcaggcgcttcaaaaaacgtatcagaag
atacttcgggaaaaggaaagtgctttagaagcaaaataccaagcaatggagagagcagca
acatttgaacatgacagagataaagtgaaaaggcaattcaagatttttagggagaccaag
gagaatgaaattcaggacttactgagggctaagcgagagttggaaagtaaacttcagagg
ctccaggctcagggaatccaagtatttgatcctggagagtctgattcagatgacaactgt
acagatgttactgctgctggaacccagtgtgaatactggactggaggagctttgggaagt
gaaccttccatagggagtatgatccagcttcagcaatccttcaggggtcctgagtttgcc
catagttctatagatgtggaaggaccctttgcaaatgtcaacagagatgactgggatgtt
gctgtagctagtttattacaagttactccgttgttttcacattctctgtggagtaacact
gtcagatgttacctcatttatacagatgaaacccagcctgaagtggatcttttccttaag
gactattcacctaaacttaaaagaatgtgtgagacaatgggatattttttccacgctata
tattttccaatagatcttgaaaatcaataccttgctgttagaaaatgggaaattgagaag
agttcattagttattttattcattcatttaaccttaccaagccttttattggaagactgc
gaagaagcttttctgaaaaaccctgaaggcaaaccacgattaatttatcatcgcttagag
gatgggaaagtcagttccaactccatccagcaattgattgatcaagtttctaacctgaac
aagaccaacaaagccaagatcattgatcactctggagatcctccagaaggagtatataaa
atttatatttatgtggaaaagattattaaacaggacatcctgggctttgagaacacagac
atggagactaaggatttgggcagtgaagattctattccagaagaagatgattttggtgat
gttctgtgggacatacatgatgaacaagagcaaatggaaactttccaacaggcttcaaat
tcagcccacgaattgggatttgacaaatattaccaacggcttaatgatctagtggcggca
ccagcaccaattccaccccttcttgtatctggaggaccaggttctggaaagtcccttctt
ttatcaaagtggattcagttgcaacagaagaattcccctaacacgctaattctttctcat
tttgtgggaaggcccatgtcaaccagctcagagccttcattgattattaaacggctaact
ctaaagttgatgcagcactcttggtcagtatctgctctgacactggatcctgctaagctt
ctagaagaatttccacgttggctagaaaaactctctgcccgtcatcaaggcagtatcatc
atcattattgattctatagatcaagttcagcaagtggaaaaacacatgaaatggctgata
gatccactgccagtgaatgtaagagtaattgtttctgtgaatgtggaaacatgccctcca
gcatggaggttgtggcctacacttcatcttgatcctctaaatccaaaagatgcaaaatct
attataattgcagaatgccactcaatggacattaaattgagtaaagagcaggagaagaag
ctagagcgacactgtcgttctgctacaacctgcaatgccctttatgtcacccttttcggc
aaagtgatggcacgtgctgggagagcaggcaatttagataaaatccttcatcagtgtttc
cagtgtcaagatactatttcattatacagacttgctctgcgatctatccaggagtccctg
gcaaatgatatggataaagaactcatgaaacagattctctgcctcataaatgttagtcac
aatggtgtgagtgaatcagaattgatggaactctaccctgagctgtcctgggctgtcttg
acctccctcattcacagtttacacaaaatgtgcttgttgacttatggttgtggcttgctc
aagtttcagcatctacaggcttgggaaacagtgagactggaatacatggaagatcccacc
attatttcttcatacaggcaaaagctaatcaactattttaccatgcagttaagtcgggac
cgagtgacttggagaagtgcagatgaactcccttggctttttcagcagcagggaagtaaa
cagaagttacatgattgccttctcaatctctttgtgtctcaaaacctttataaaagagga
cactttgctgaattgctgagttattggcagtttgttggcaaagacaaaagcgcaatggca
gcagagtactttgattcattgaagcagcacgagaaaaactgggaaggcgaggagaacatg
atttgcctggcggatctttatgaaaccctggggcgatttctcagggatctaggcctcctt
agtcaggctgtggtgcctttgcagaggtctctagaaattcgagaaacagctttagatcca
gatcacccaagagtggctcagtccctccaccaactagcgagtgtgtacgtgcagtggaag
aagtttggcaatgcagaacagttgtataaacaagcattagaaatcgcagaaaatgcttat
ggcgcggagcatccacatattgctcgtgaacttgaggcacttgcaactttgtaccagaaa
caaaataaatatgaacaagctgaacattttaggaaaaaatcctttaaaattcgtcagaaa
gctacaaggagaaaaggcaactcgtatggatttgcccttttacgtagacgagccctacag
ttagaagagctcacgttaggtaaggacacccctgacaatgctcggaccctcaatgaactg
ggagttctctactatcttcagaataacctggaaacagccgaccagtttctgaagcggtcc
ttagaaatgagagagcgagttctaggaccagatcacccagactgtgcccagtctttaaat
aatctggcagctctgtgcaatgaaaagaaacagtatgataaagcagaagagctttacgaa
agagctttagacattcggagacgagcattagctcctgatcacccttctttggcctataca
gtgaagcaccttgcaatcttatataagaaaatggggaaacttgacaaagctgtacctttg
tatgagctagctgttgaaattcgacagaaatcttttggcccaaagcaccctagtgtagct
actgccctggtgaacttagctgttctctatagccaaatgaaaaaacatatcgaagccttg
ccattatatgaaagagcattaaagatttatgaagacagcctgggtcggatgcatcctcga
gttggagaaacattaaaaaatttagctgtgcttagctatgaagaaggggattttgaaaaa
gctgctgaactatacaaaagggcgatggaaataaaagaagcagaaacatcacttttgggt
ggaaaagctccttcccgacattcatcaagtggagacacatttagcttaaaaacaacccat
tctcctaatgttttccttcatcagggaccaaggtaa
DBGET
integrated database retrieval system
