Puma concolor (puma): 112850476
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Entry
112850476 CDS
T08890
Symbol
RC3H2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoo03000
]
112850476 (RC3H2)
04121 Ubiquitin system [BR:
pcoo04121
]
112850476 (RC3H2)
Transcription factors [BR:
pcoo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
112850476 (RC3H2)
Ubiquitin system [BR:
pcoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112850476 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112850476
NCBI-ProteinID:
XP_025769920
UniProt:
A0A6P6H2G4
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLIPRSTDSTLRALETVKKVGKVGTNGQNATGPSAE
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPPKSSAFITRVPVYPQHSENIQYFQ
DPRTPIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTSVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDVDYVPYVNAVDSRWSSYGNEAT
SSAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGRHLTLNLLSKEIELRNGESDYTEDASDTKPDRDIELELSALDTDEPDGQGEQMEEILD
IQLGISSQNDQLLNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFS
QPLPVSISNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtctgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaagttaagtaatctaggtgagaacaaacactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacactcgtaaactgt
cagctggtggaggaagaaggtcgtgtaagagccatgcgagcagcccgttcgcttggagaa
agaactgtaacagaactaatattacagcaccagaatccccagcaactgtctgccaaccta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctggtgttgctcgcattagaagatggttctgctctctcaaggaaagtactggta
ctttttgttgttcaaagactagaaccaagatttcctcaggcatctaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcatgttttaaagttaccaaaagggatgaagac
tcttccttgatgcagctaaaggaggaatttcggagttatgaagcattacgcagagaacat
gatgctcaaattgttcacattgctatggaagcaggactccgcatttcacctgagcagtgg
tcctcacttctgtatggtgacttggcacataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcagccaaacagcaaatacaagactagcatgtgccgagatctgcgt
cagcaaggagggtgtccccgaggaacaaattgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaatggaatttcaaatgcagaa
aacagtgtttcccagctaatcccacgtagtactgacagtactttaagagctctggagact
gtgaagaaagtggggaaggttggcactaatggtcagaacgcaactgggccttctgcagag
tctgtaactgaaaataaaattggctctccacccaagactcctgtaagtaatgtagcggct
acctcagctgggccttctaatgttggaacagagctgaattctgtgcctccaaaatccagc
gcatttataactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactccgatacccttcgaagtcccacagtacccccagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgagatccaat
aatgttccagagtcctccctcccacctgcttctatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccacagccgtat
ggaccagttccgccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagtaattctttacctccaatg
gatgtgatgcactcgtctgtttatcagacgtctttgcgggaaagatataactcattagat
gggtactattcagtggcttgccagccaccaagtgagccaaggacaagtgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgcactgatgtagat
tatgttccttatgtcaatgctgttgattcaaggtggagttcatatggtaacgaggccacg
tcatcagcacactatattgaacgggacagattcattgttactgatttatctggtcatcga
aagcattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactca
ttgcttcttcagagggaggccaatgcactggccatgcagcagaagtggaattccctggat
gaaggccgccaccttaccttaaatcttctaagcaaggaaattgaactgagaaatggagag
agtgattatacagaagatgcaagcgatactaagcctgatagggatattgagttagagctt
tcggcacttgatactgatgaacctgatggacaaggtgaacaaatggaagagatcctggac
atacagctgggtatcagttctcaaaatgatcagttgctgaatggaacagcagtggaaaat
gggcatccagtccaacagcaccagaaggagccactggagcagaagagacagagtttaggt
gaagaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagc
cagccactcccagtgtccattagcaatgcaagttgcctccccatcaccacatctgtcagt
gttggcaacctcattctgaaaactcacgttatgtctgaagataaaaacgactttttaaaa
cctgttgcaaatgggaagatggttaacagctga
DBGET
integrated database retrieval system
