Puma concolor (puma): 112852309
Help
Entry
112852309 CDS
T08890
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoo03021
]
112852309 (SUPT6H)
03036 Chromosome and associated proteins [BR:
pcoo03036
]
112852309 (SUPT6H)
Transcription machinery [BR:
pcoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112852309 (SUPT6H)
Chromosome and associated proteins [BR:
pcoo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
112852309 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
112852309
NCBI-ProteinID:
XP_025771588
UniProt:
A0A6P6H7R4
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcagaggaagagtacaatgatgaaggc
gaagtggtgccccgagtcaccaagaaatttgtggaggaggaggatgacgatgaggaggag
gaggaggagaacctagatgatcaggatgagcaaggcaatctgaaaggctttatcaatgat
gatgacgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgacgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgacgaggatgacgacgaggaggaatatggcaaagaggaacat
gaaaaagaggctattgccgaggaaatcttccaggatggggaaggggaagaagggcaggag
gctgtggaggcccccatggctcctccagaggaggaggaagaagatgatgaggaatcagac
atcgatgacttcattgtggatgatgacggacagcctctgaaaaaacctaagtggcggaaa
aagcttcctggatacacagatgcggccctgcaggaagcccaggagatttttggtgtggac
tttgactatgacgagtttgagaaatacaatgagtatgacgaagaactggaggaagagtat
gagtatgaagatgatgaggccgagggtgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatctttgagatgtatgagcccagcgagctagaaagcagc
cacctcacagatcaggacaatgaaatccgagccactgacctgcctgagaggttccagctc
cgctccatcccagttaagggggctgaagatgacgaactagaagaagaagctgactggatc
tacaggaatgcctttgccacaccaaccatttctcttcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgtaaagggcccagcacaattcagaagattaaa
gaagccctgggtttcatgcgaaatcaacactttgaggtgccttttattgctttctaccgt
aaggagtatgtggagcctgagttgcacatcaatgacctatggagggtgtggcagtgggat
gaaaagtggacccaactgaggatccgcaaagagaacctaacacggctgtttgagaagatg
caagcttatcagtacgagcagatctctgctgatcctgacaaacccctggctgatggcatc
cgggctctagataccaccgacatggagaggcttaaggatgtccagtcaatggatgagctg
aaagatgtctacaaccatttcttgctatattatggtcgtgatatccccaagatgcagaat
gctgccaaagccagccgcaagaagctgaagcgtgtgagggaagagggagatgaggaaggt
gagggtgaagaggcagaagacgaggagcagaggggcccagagctcaagcaggcctcccgc
cgagacatgtacaccatttgccagagtgctggcctagatggcctggccaaaaagtttgga
ctgactcctgaacaatttggggaaaacctgcgggacagctaccagcggcacgagacagag
cagttccctgcagagcctttggagctggccaaggattatgtttgcagccagttccctaca
cctgaagctgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
ctcgtccgacaggtgctgaggcagaccttccaggagagagccaagctaaatataaccccc
accaagaaaggtagaaaggatgtggatgaggcccactacgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatctgcttggctgaa
gacgaagggctgctcaccattgacatcagcatagatatgaagggggtagaaggctacggc
aatgaccagacatatttcgaagagatcaaacagttttactaccgagatgagttcagccac
caggtgcaggagtggaaccggcagcgcaccatggccatcgagcgagccttgcagcagttc
ctctatgtgcagatggccaaagagctcaagaacaagctgctggccgaagccaaagaatat
gtcataaaggcctgtagtcggaaactctacaactggttgagggtggcaccctaccggcca
gatcaacaggtagaggaagatgatgactttatggatgagaaccaagggaagggcatccgc
gtcctaggcattgctttctcctctgccagagatcaccccgtgttctgtgccctggtcaac
ggtgaaggagaagtgacagacttccttcgactgccccattttaccaaacggcgaactgca
tggagagaggaagaacgggaaaagaaggctcaagacattgaaaccctaaagaaatttctt
ctgaataaaaagcctcatgtggtgacagttgcaggagaaaacagggacgcccagatgttg
attgaagatgtgaagcgcattgtgcatgagctggaccagggccaacaactgtcctctatt
ggggtggagctggttgacaatgagttggccattctctacatgaatagcaagaaatcggag
gcagagttccgggattatcctccagtgctgagacaggccgtctccctggcccgacgcatc
caggaccctctgattgaatttgcccaggtgtgcagctctgatgaagacatcctgtgtctc
aagtttcatcccttgcaagagcatgtggtgaaagaggagctgctcaatgccttatactgt
gaatttatcaaccgagtcaatgaggttggggtcgatgtcaaccgtgccatcgcccaccca
tatagccaggccttaatccagtacgtctgtggtctgggacctcgaaaagggacccatctc
ctgaagatcctgaagcagaacaacaccaggctggagagtcggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacacggcc
tccctgggggacagcactgactcatacattgaagttcttgacggttcccgagtccaccct
gagacctatgagtgggccaggaagatggcagtggatgctctggaatatgatgaatcagct
gaggacgctaaccccgcaggagccctcgaagagatcttggaaaacccagagcgactgaag
gatctggaccttgatgcctttgcagaagaactggagaggcagggctatggtgacaaacac
atcaccctgtatgacatccgggcggagctgagctgtcggtataaggacctccggacagcc
taccgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcatcatctgcaacgtcactggcattgcccacaggcgtccacag
ggtgagagctatgaccaggcgatccgcaacgatgagacagggctgtggcagtgccccttc
tgtcagcaagacaatttccctgaactaagcgaggtctggaaccactttgacagcggctca
tgcccaggccaggccattggtgtcaaaacacggctagacaatggtgtcactggcttcatc
cccaccaagttcctcagtgacaaagtggtaaagcggcccgaggagcgagtgaaggtggga
atgaccgttcactgccgcatcatgaagattgacatcgagaagttcagcgcagaccttacc
tgccgaacctcagacctcatggacaggaacaacgagtggaaactgcccaaggacacgtac
tatgactttgacgctgaagcagcagaccacaagcaggaggaggacatgaaacggaagcag
cagcggaccacatacatcaagcgagtgatcgcacacccatccttccataatataaatttc
aagcaagcagaaaagatgatggagaccatggaccagggtgatgtgatcatccgaccaagc
agcaagggtgagaatcacctgacagtgacctggaaggtcagtgatggcatctaccagcac
gtggacgtgcgggaagagggcaaggaaaatgccttcagcctgggagccaccctgtggatc
aatagtgaggaatttgaagacttggatgagattgttgctcgctatgtccagcccatggca
tcctttgcccgggaccttctgaatcacaagtattatcaggactgcagtggtggggatcgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatacgtaacagtgactccagaaggattccggtaccggggccaaatc
ttccctactgtgaacggacttttccgatggtttaaggatcactaccaggatcctgtacca
ggcatcacccccagtagcagcagtaggacccggacacctgcttctatcaatgccacccca
gccaatatcaaccttgcagatctgacacgggctgtgaatgccctgcctcagaacatgacc
tcgcagatgttcagtgccatcgcagccgtgacaggccaaggacagaaccccaatgccacg
ccagcccagtgggcctcgagccagtatggctatggtggcagtggagggggcagcagcgct
taccacgtgttcccaacgccagcccagcagccagtggccacaccactaatgacccccagc
tactcctacacaaccccaagccagcccatcaccacaccacagtaccaccagctacaggcc
agcaccaccccacagtctgcccaggcccagccccagccctcctccagctctcggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactgggggaagatggcagagcag
tggctacaggagaaggaagcggagcggcggaaacagaagcagaggctaacacctcggccc
tctcccagccccatgatcgaaagcacccccatgtccattgctggcgatgccaccccgctc
ctggacgagatggaccggtag
DBGET
integrated database retrieval system
