Puma concolor (puma): 112852350
Help
Entry
112852350 CDS
T08890
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112852350 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoo03041
]
112852350 (PRPF8)
Spliceosome [BR:
pcoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112852350 (PRPF8)
Complex C
U5 SnRNP specific factors
112852350 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
112852350
NCBI-ProteinID:
XP_025771625
UniProt:
A0A6P6H7C0
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctctagccccg
ttgccagactacatgtcggaggagaagctgcaggagaaagcccgaaaatggcagcaatta
caggccaagcgctatgcagaaaagcggaagtttggatttgtggatgctcagaaggaagac
atgcccccagaacacgttaggaagatcattcgagaccatggagacatgaccaacaggaag
ttccgccatgacaaaagggtctacttgggtgccctaaagtatatgccccatgcagtactg
aaactcctggagaacatgcctatgccttgggagcagattcgagatgtgcctgtgctgtac
cacatcactggagccatttcttttgtcaatgagattccctgggtcattgagcctgtctac
atctcccagtgggggtcaatgtggattatgatgcgccgtgaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaagagccacctttggattatgctgac
aacatcctagatgttgagccactggaggccattcagctagagctggaccctgaagaggat
gcccctgtattggattggttctatgaccaccagccactgagggacagccggaagtatgtg
aatggctccacttaccagcgctggcagttcacactgcccatgatgtccactctctatcgc
ctggccaatcagctcctgacagacttagtagatgacaactatttctatctgtttgatttg
aaggccttctttacctccaaggcactcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaacctccaggatgaagactggaatgaattcaatgatattaac
aagatcatcatccggcagcctatccgcactgaatacaagattgctttcccttatctgtac
aataatcttccacaccatgtccacctcacctggtaccatactcctaacgttgtgttcatc
aaaactgaggatcctgatctgccagctttctactttgatcctttaatcaacccaatttct
cataggcactctgtcaagagccaggaaccgttgcctgatgatgatgaggagtttgagctc
ccagagtttgtggagcccttcctgaaggacacacccctctacacagacaatacagccaat
ggcattgctctcctctgggccccacggcccttcaacctacgctctggtcgcacccgccgg
gccctggatatcccccttgtcaagaactggtatcgagagcattgtcctgctgggcagcct
gtgaaagtgagagtctcctaccagaaactgcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcccaaaagaagagatacctgttccgttccttcaaagccaccaaa
ttctttcagtccacgaagctggactgggtggaggtggggctacaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgtaaaaacctcaactatctgcacctggattac
aacttcaatcttaagcctgtgaagaccctcaccaccaaggaaagaaagaaatctcgtttt
gggaatgctttccatctctgtcgagaagttctgcgtttaactaagctggtggtagacagt
catgtgcagtatcgtttgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgcccatgtggggcagctgacgggcatgtaccgctacaagtacaagctgatgcgg
cagattcgcatgtgcaaggacctaaaacatctcatctattaccgcttcaacacgggccct
gtagggaagggccctggctgtggcttctgggctgcaggctggcgggtctggctgtttttc
atgcgtggcatcacccctttgttggagcggtggctaggcaacctcctggcccgacagttt
gaaggccgacactctaagggggtggcaaagactgtaacaaagcagcgagtggagtcacat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgaggga
attaaacagaacaaggcgcggacgatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtacctgggctgccaacacccatagagaatatgatcctt
cgatatgtgaaggccaaggctgattggtggactaacactgcccactacaaccgagaacgg
atccgccgtggagccactgtggacaagactgtttgcaaaaagaacctgggccgcctcact
cggctctacctgaaggcagaacaggagcggcagcacaactacctgaaggatgggccgtac
atcacagcggaggaggcggtggcagtgtataccaccactgtgcactggctggagagccgg
aggttctcacccatcccgttccccccactctcctacaagcatgataccaagttgctcatc
ttggccttggagcggctcaaagaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaggagctaggtctgatcgagcaagcctatgacaacccccatgaggcattgtcccgc
atcaaacgtcacctcctcactcagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacttggtgccggtttatgatgtggagccactggagaagatcactgacgcc
tacctggaccagtacctgtggtatgaagctgacaagcgccgccttttcccaccgtggatc
aagcctgctgacacagaaccaccccctctgcttgtttacaagtggtgccaaggcatcaat
aatctgcaggatgtgtgggagacaagtgagggtgagtgcaatgtcatgctggaatcacgc
tttgaaaagatgtatgaaaagatcgacttgaccctgcttaataggctgctgcgactcatc
gtagaccacaacatagccgactacatgactgccaagaacaacgtggtcatcaactataag
gacatgaaccatacaaattcttacgggatcatcagaggcctgcagtttgcctcattcatt
gtgcagtactatggcctggtgatggatttgcttgtgttgggattacatcgggccagtgag
atggctgggccccctcagatgccaaatgactttctcagtttccaggatatagccaccgag
gctgcccaccccatccgtctcttctgcagatacattgatcgcatacatattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcatcctgatccc
aacaatgaaaatatcgttggctataataacaagaagtgctggccccgagatgcccgcatg
cgcctcatgaagcacgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacgatcagtgactacagttcagtgggagaacagcttcgtatctgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggctttgagtgccgcatcctgcctaaatgc
cgcaccagctatgaggagttcactcacaaggatggggtctggaacctacagaatgaggtt
actaaagagcggacagctcagtgtttcctgcgagtggatgatgagtcaatgcagcgtttc
cacaaccgcgtgcgtcagattctgatggcctctggctccaccaccttcaccaagattgtg
aataagtggaacactgctcttattggccttatgacatattttcgggaagctgtagtgaac
acccaggagctcctggacttgctagtgaagtgtgagaacaagatccagacacgtatcaag
attggcctcaattccaagatgccgagtcgtttccctcctgttgtgttctatacccctaag
gagttgggtggacttggcatgctctcaatgggccatgtactcatcccccagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtaccgctacatacaaccatgggagagcgagttcatt
gattctcagagggtctgggctgagtatgcactgaagagacaagaggccattgctcagaac
agacgactgaccttagaagatctagaggattcatgggatcgtggcattcctcgaatcaac
acccttttccagaaggaccggcacacgttggcgtatgataaaggctggcgcgttcgaact
gactttaagcagtaccaggtcttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtacagacatgatccaggccctgggtggt
gtggaaggcattctggaacacacactcttcaagggcacttacttccctacctgggagggg
cttttctgggagaaggccagtggttttgaggagtcgatgaagtggaagaagctaaccaat
gctcagcgatcgggattgaaccagattcccaatcgtagattcaccctctggtggtcccca
accatcaaccgagccaatgtatatgtaggctttcaggtgcagctggacctgaccggtatc
ttcatgcatggcaagatccccacactgaagatctctctcatccagatcttccgagctcac
ttatggcagaagatccacgagagcattgtgatggacttgtgtcaggtatttgatcaggaa
ctggatgcactagaaattgagacagtacaaaaggagacaattcacccccgaaagtcctat
aagatgaattcttcctgtgcagatatcctgctttttgcctcctataagtggaatgtctcc
cggccctcattgctggcagactccaaggatgtgatggatagtaccaccactcagaagtat
tggattgatatccagttgcgctggggggactatgactcccatgacattgaacgctatgcc
cgggccaagttcctggactacaccacagacaacatgagtatctatccttcacccactggt
gtgctcattgccattgacctggcctataacctgcatagtgcctatggaaactggttccca
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgcaaggggctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaactatggtgagctcttctccaaccaaattatctggtttgtg
gatgacactaatgtctacagagtgactattcacaagacctttgaagggaatttgacaacc
aaacctatcaatggggccatcttcatcttcaatccacgcacagggcagctgttcctcaag
ataatccacacatctgtgtgggctggacagaagcgtctggggcagctggctaagtggaag
acggctgaggaggtggctgccctgatccgatctctgcctgtggaggagcagcccaagcag
atcattgtcactaggaagggcatgctggacccattggaggtgcacttgctggacttcccc
aatattgtgatcaaaggatcggagctccagctccctttccaggcttgtctcaaggtggaa
aagtttggggacctcatccttaaagccactgaaccccagatggttctttttaatctctat
gatgactggctcaagactatctcatcttatacggctttctcccgcctcatcttgattctg
cgtgccttgcacgtgaacaatgaccgggcaaaggtgatcctgaagccagacaagacgact
attacagagccacaccatatctggcccactctgactgacgaggaatggatcaaggtggaa
gtgcagctcaaagatctgatcttggccgactacggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcggaaattcgagacatcatcctgggtatggagatctcggcaccatca
cagcagcggcagcagatagcagagatcgagaagcagaccaaggaacagtcacagctgaca
gcaacacagactcgtactgtcaacaagcatggtgatgagatcattacttctaccaccagc
aactatgagacgcagactttctcctctaagactgaatggcgggttagggccatctctgct
gccaaccttcacctgaggaccaatcatatctatgtttcatctgatgacatcaaggagact
ggttatacctatatccttcccaagaacgtgcttaagaagttcatctgcatatctgacctg
cgggcccaaattgcaggatacctgtatggggtcagcccaccggataacccccaggtgaag
gagatccgctgcatcgtgatggtaccgcagtggggcactcaccaaaccgtgcatctgcct
ggccagctgccccagcatgagtacctcaaggaaatggaacccttaggatggatccacact
cagcccaatgagtccccccagctgtcaccccaggatgtcaccacccatgctaagatcatg
gctgacaacccatcttgggatggtgagaagacgattatcatcacctgcagcttcacacca
ggctcctgcacactgacagcctataagctgacccccagtggctatgaatggggtcgccag
aacacagacaagggcaacaatcccaagggctatctaccctcgcattatgaaagggtccag
atgctgctgtcagaccgcttccttggcttttttatggtccctgcccagtcctcatggaac
tacaactttatgggtgtgcggcatgatcccaacatgaagtatgagttgcagctggcaaac
cccaaagagttctaccacgaggtgcacagaccttcccacttcctcaacttcgctctcctg
caagagggcgaggtctactccgcggatcgagaggacctctatgcctag
DBGET
integrated database retrieval system
