Puma concolor (puma): 112853320
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Entry
112853320 CDS
T08890
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03440
Homologous recombination
pcoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112853320 (PALB2)
03460 Fanconi anemia pathway
112853320 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoo03400
]
112853320 (PALB2)
DNA repair and recombination proteins [BR:
pcoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
112853320 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
112853320 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
112853320
NCBI-ProteinID:
XP_025772668
UniProt:
A0A6P6HAZ5
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MEEPPGKPLSYEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKNSVKKTAEEHDCLFQ
QDISPQLNHSESKNKVSPCETLQISTHLDEETGEKTPITLGIEPEYFNLGHGPVEQLHIQ
SDIQEHFPYQVSGPSGEKRQSKLPERRKQQQRTLTSQARESFFDTDSLILSGKRLKELEE
INRENPRTPVTRRTYLSSSTCDILDSPAPVTETNVRGVLTPPTAKPQRVVDALVRGNHFP
TVSTLASFTPSNNSSGQHLEHKPPKGDCELITHGLKNIIPASPVNLEAQDQKMTVSTDNP
EVNKAVSASGQLPRSPDLETDNLCSVNEFAYNNLSANGNQNLKGQNHTEECLKSPHNTLD
DRNESPQEKEVVSQSKSLSPEVISPASAENQTHSCTMLEGLPFPAEYYVRTTRRMSSYQR
KVALEVVIQNHLGVKKKGYKNKSKEATKNLNLPSEETDQSGIRTSDTCTRQPSSRNPQKR
PSLTEVNSPTGPPKDNLSRKAVIQPSGRRHGRKTKSICTPVLDDGELLLPTFGTSGVNRS
KEEVALNKEQNGKAIIHGKKDDRQKEDSLSSRNNAYLALDSAAFRTSFPKNEMLSLKQLS
SVLKTTDFQLPDEDFGPLKLKKLKSQSEKSVEPFVSKMYGDKLLKEGNCVVLEEMTPTQI
DIEMEDLEEEILVLPGKAQPKTPNPTSQPQKKGLSSSIVLFTPFNTVTPEDNDRLTADVC
SPAFPILGTTPAFGSQARCERVSTEVVGSTCSVPQLPHLKDCDRKQGDGWASPSKSDGSP
VVSGREGQPSCDSDSGSQAKLLPTESVTSEENQLCGNMHVESWKQSTEQTEVADLPACNG
LIPGHLQLVSKLKNPSGSCSVDVSAMWWEIAGFKEPCIITACEYVVSLWKPLDTWQWEKL
YSWHFTEVPVLQIVPVPDVCNLVCVALGNLEIREIRSLLCSSDGGCEKQVLLSSGNIKAV
LGLTERRLVSSSGTLCDQRVEIMTFAEDGRSKEKQFLMSPEETVLTFAEVQGVQEALLGT
TVMNNIVIWNLKTGQLLKKMHIGDSYQASVCHKAYSEMGLLFVVLSHPCAKESEPLGSPV
FQLIVINPKTTLSVGVMLYCLPQGQAGRFLEGDVKDHFAAAVLTSGTIAIWDLLLGHCTA
LLPPVSDQHWSFVKWSGTHSHLLAGQKDGNIFVYRN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaaacctctcagctatgaggaaaaggaaaagttgaaggaaaag
ttagcattcttgaaaagggaatacagcaagacgctggcccgcctccagcgtgcccaaaga
gctgagaaggttaagaattctgttaagaaaacagcagaagaacatgattgcttgttccag
caggacatttcaccacagctaaaccactcagaatctaaaaataaagtatctccttgtgag
acattacaaatcagcacccatctggatgaagaaactggagaaaagacacctatcacactt
ggcattgagcctgagtacttcaaccttggacatggccccgtggaacaattacatatacaa
agtgatatccaagaacattttccctaccaggtcagtggtcctagtggtgagaaaaggcag
agtaagttgccagagagaagaaagcagcagcagagaacattaacttcacaggcgagagaa
tctttctttgacacggattcactcatactctctggaaaaagactaaaggaactggaagaa
atcaatagagagaatcctagaacacctgtaactagaagaacttacctttcaagttctacg
tgtgacattctggattctccagcaccagtgacagaaactaacgtaaggggtgtattaact
ccaccaactgccaaaccacaaagagttgttgatgcactcgtaagaggaaatcatttcccc
acagtgtctacacttgcttcatttactccatcaaataacagtagtggtcagcaccttgaa
cataagcctcctaaaggcgactgtgaactcattactcatggtttaaaaaacattatccct
gcttcacctgtaaacctagaggcacaagaccaaaaaatgactgtctctacagataaccca
gaagtaaataaagctgtaagtgcaagtggccagctgcctagaagtcctgacttagagaca
gataatttgtgctctgtgaatgaattcgcttacaataacttatcagcaaatggaaaccaa
aatttaaaaggacagaatcacacagaggagtgtttaaaatctccccataacactcttgat
gatagaaatgaaagtcctcaggaaaaagaggttgtaagtcaatctaagagtcttagccca
gaagtaatctctcctgcttctgcagaaaatcaaacacattcttgcacaatgcttgaaggc
cttccatttcctgcagaatattatgttagaacaacacgacgcatgtcaagttaccagaga
aaagtagccctggaagttgtaattcaaaatcatttgggtgtcaaaaagaaagggtataaa
aataaaagtaaggaggcaactaaaaatttaaaccttcccagtgaagaaactgaccagagt
ggaattaggacctctgacacatgcacaagacaaccaagttcaagaaatcctcagaaacgt
ccctctttaactgaagtcaactctcccactgggccccctaaagataacctttcgaggaag
gcagttatccagccatctggtaggagacacggaagaaaaacaaagtcaatctgcacccct
gtattagatgatggtgaactccttttgccaacttttggcacatcaggtgttaatagatcc
aaggaagaggttgccttgaacaaagagcagaatggaaaggcaattattcatgggaagaaa
gatgatcgtcaaaaagaggactccctttcttccagaaataatgcttatttggctttggat
tctgctgcattcaggacttcatttcctaagaacgagatgctaagtttaaagcaactgtcc
tctgttctcaaaaccacagattttcagttacctgatgaagactttggacctcttaagctt
aagaaactgaagtcccaatcagaaaaatcagtggagccttttgtatcaaaaatgtatggg
gataagctccttaaggagggaaactgtgttgttttggaagaaatgacacctacacaaatt
gatattgaaatggaggacttggaagaggaaattcttgttctcccaggaaaagcacaacct
aaaacaccaaacccaacaagccagcctcagaagaagggcctttcttcatccatagtactt
ttcactccttttaataccgtcacccctgaggataatgacagactgacggcagatgtgtgt
tcgcccgccttccccatcctaggcactactccagctttcggctcccaagcacgctgtgaa
agagtgtccacggaggtggttggatcaacttgctctgtaccccaacttcctcacttgaaa
gactgtgatcggaagcaaggcgacggttgggccagcccctcaaaatcagatggcagcccg
gttgtgtcaggtcgggaaggacagccttcctgtgacagtgattctggttcccaagcaaaa
cttcttcccactgagtcagtcacttccgaagaaaatcagctgtgtggaaatatgcacgtg
gagtcgtggaaacagtccactgagcagactgaagtagcagaccttcctgcttgtaatggc
ttaattccaggccacctacaattggtttcgaagttaaagaatccttctggttcctgttcc
gtggacgtgagtgccatgtggtgggaaatagccggtttcaaagagccatgtatcataact
gcctgtgaatacgtagtttctctttggaaacctctagatacttggcagtgggaaaaactt
tattcctggcactttacagaggttccagtgttacagatagttccagtgcctgatgtttgt
aacctcgtatgcgtggctttgggaaatttggaaatcagggaaatcagatcattactttgt
tcctctgatggtggatgtgaaaagcaagtgctactgagttctggaaatataaaagctgtg
cttggcctgacagagaggaggctagtcagtagcagtgggaccctttgtgaccaacgagta
gaaatcatgacatttgcagaagatggaagaagcaaagaaaaacaatttttgatgtcccct
gaagagactgtactaacttttgctgaggtgcaaggggtgcaggaagctctgcttggtacc
actgtaatgaacaacattgttatttggaatttaaaaactggtcagctcctgaaaaagatg
cacattggtgattcctaccaagcttcagtctgtcacaaagcctattctgaaatggggctc
ctgtttgttgtcctgagccatccttgtgccaaagagagtgagccgttgggaagccccgtg
tttcagctgattgtgattaaccctaagacaaccctgagtgtgggtgtgatgctctactgt
cttccccaagggcaggctggaaggttcctggaaggtgatgtgaaagatcattttgcagcg
gcagtattgacttctggaacaatcgccatctgggacttacttctgggtcattgtactgcc
ctcctcccacctgtctctgaccaacattggtctttcgttaaatggtcaggtacacattct
catttgttggccggacaaaaagatggaaatatatttgtctaccgcaactaa
DBGET
integrated database retrieval system
