Puma concolor (puma): 112854023
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Entry
112854023 CDS
T08890
Symbol
CASC3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03013
Nucleocytoplasmic transport
pcoo03015
mRNA surveillance pathway
pcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112854023 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
112854023 (CASC3)
03015 mRNA surveillance pathway
112854023 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoo03019
]
112854023 (CASC3)
Messenger RNA biogenesis [BR:
pcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112854023 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
112854023
NCBI-ProteinID:
XP_025773247
UniProt:
A0A6P6HBZ3
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MTGFLRPEAQMWDLLFAGTGAELGENQGEEGEYSEEENSKVELKSEANDAANCSAKEEKG
EEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPHGCSVRKGLLRPC
SFPGKTRXRESAKPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNP
DDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRNAAGTGRMSAP
RNYSRSGGFKEGRAGFRPVDAGGQHGGRSGETVKHEASYRSRRLEQTPVRDPSPEADAQV
LGSPEKEEAASEIPAAAPDAAPPAPDRPIEKKSYSRARRTRIKAGDAVKVAEEVPPPPEG
LNPAPPVPETTPSPPAKTGAWEAPVDSTTSGLEQDVAQLNITEQNWSPGQPSFLQPRELR
DEGPQLGLRAEKAESRCHRLQRYRCSSRRPAPGSRRCLSPMRQTPRPPCPAKRAAADDPP
FYGERPPPASSLRTAPVAGAAGRLES
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgactggcttccttaggcctgaagcccagatgtgggatcttctgtttgcagggacagga
gcagaacttggggaaaatcagggtgaagaaggggaatacagtgaagaggaaaactccaaa
gtggagctgaaatcagaagccaatgatgctgctaattgttcagcaaaagaagagaaggga
gaagaaaagcctgacaccaaaggcactgtaactggagagaggcagagtggggatggacag
gagagcacagagcctgtggagaacaaagtgggtaaaaaaggccctaagcatttggatgat
gatgaggatcggaagaacccacatggctgttccgtgaggaaagggctcttgaggccatgt
tccttcccaggcaaaaccaggtagagggagagtgcaaaacccaaagggagacagcgaaag
ctatggaaggatgagggtcgctgggagcatgataagttccgggaagatgaacaggctcca
aagtctcgacaggagctaattgctctttatggctatgacatccgctcagctcacaatcct
gatgacatcaaaccccgaagaatccggaaacccaggtttgggagtcctccgcaaagagat
ccaaactggattgttgagcgaccaaacaagtcccatcgccatcagggtcctgggggcacc
ctaccaccaaggacatttattaacagaaatgctgcaggtactggccggatgtctgctccc
aggaattactctcgatctgggggcttcaaggaaggtcgtgctggttttaggcctgtggat
gctggtgggcagcatggtggccgatctggtgagactgttaaacatgaagccagttaccgg
tcacggcgcctagagcagactcctgtgagggatccatctccagaagctgatgctcaagtg
cttggcagtcctgagaaggaagaggcagcctcagagattccagctgctgctcctgatgct
gcaccaccagcccctgacaggcctattgagaagaaatcctattcccgggcaagaagaacg
agaatcaaagctggagatgcagtcaaggttgcagaggaggtgccccctccacctgaaggg
ctgaacccagcgcctccagtcccagaaactaccccttctccacctgctaagactggagcc
tgggaggctccagtggattcaactacaagtggacttgagcaagatgtggcacaactaaat
ataacagaacagaattggagtccagggcagccttcgttcctacagccacgtgagcttcgg
gatgaagggccccagctcggcctccgcgctgagaaggcagagagccgctgccaccgcctc
cagcgctaccgctgcagctcccgccgccccgcgccggggagccgccgctgtctgagcccg
atgcgccagactcctcgtcctccgtgtcctgcgaagcgcgctgccgccgacgatccgcca
ttttacggagaacggccgccgccggccagctccttacgtaccgcgcccgtcgcaggggct
gccgggaggcttgagagctag
DBGET
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