Puma concolor (puma): 112854395
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Entry
112854395 CDS
T08890
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112854395 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcoo00536
]
112854395 (COL13A1)
Glycosaminoglycan binding proteins [BR:
pcoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112854395 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
112854395
NCBI-ProteinID:
XP_025773637
UniProt:
A0A6P6HD55
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MQQKACLQRAGPSPEPAALGAGALSGPEGPPGPAGRPGLPGDKGAIGIPGRVGQQGRREE
EGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGEMGLMGPRGQPGPQ
GQKGEKGQCGEYPHREHPSGTFSSLRSSQIITLKLLPLLNSVRLAPPPVIKRRTFQGEQG
QAGIQGPPGPPGPPGPSGPLGPPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPG
MPGKHGAKGAPGITVAGMKGEPGTPGAKGEKGAAGSPGLLGLLGQKGEKGDAGNSFGGGR
GEPGPPGLPGPPGPKGEAGVDGQAGPPGRQGDKGEPGAAGEQGPAGPKGSKGEPGKEMVD
YNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKP
GDMGPPGPQGPPGKAGPTGMKGEDGHVGSPGEKGEKGETGQAGPPGLDGPTGEKGEPGGQ
GRPGTTGLPGPIGLPGFTVPGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKG
DRGPLGLPGASGLDGRPGPPGTPGPVGVPGPAGPKGERGSKGDLGMTGPSGAAGLPGLHG
PPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNKRPTPPAGTVV
IPMAGDFQDVALPEGS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaaagcctgcttgcagcgggctgggccttcgccggagcctgcagcgctggga
gctggggccctgtcaggcccggagggacctcctggtcccgctggaagacccggcctccca
ggggacaaaggtgccattgggattcctggacgtgtgggacagcagggaagaagggaagaa
gaaggggccccaggagatgccggcatgtccatcatcggtccccgcggcccccctggtcag
ccgggcactcgaggttttcctggatttccgggtcccatcgggctagatggaaaaccgggc
caccccggacccaaaggagagatgggcctgatgggtccccgaggacagccgggacctcaa
ggacaaaaaggagaaaagggtcagtgtggagagtacccacatcgggagcacccaagtggc
actttttcgtctctgcgctccagtcagatcattaccctgaagctgctgcctctcctcaat
tcagtgcgactggctccacccccagtcataaaaaggcggaccttccagggcgaacagggc
caggccggtatccaaggaccaccggggccaccaggcccccctggaccgagcggacctctg
gggcccccgggactgccagggcccatggggccacccggcttacctgggcctccaggacca
aagggagacccaggaatccagggttaccacggccgaaagggagaacgaggcatgccgggg
atgccgggcaaacacggagccaagggggctcccggaatcaccgtggcggggatgaagggt
gagccggggaccccaggagccaagggcgaaaagggggctgcaggctcccccgggctgctc
ggcctcctggggcagaagggagaaaaaggcgacgctggcaactcctttggagggggcaga
ggggagcccggccccccagggctacctgggcccccaggcccaaagggagaagctggtgtt
gatggccaggccggccccccaggacggcaaggagacaagggtgagcccggagcagccgga
gaacagggaccggctggccccaagggcagcaagggggaaccaggcaaagaaatggtggac
tacaatgggaacatcaacgaggctctccaggagatccgaacgctggccttgatggggccc
cctggtcttcccgggcaaatcggcccacccggagccccggggatcccaggccagaagggg
gagattggacttccaggccctccaggacacgatggggaaaagggacctcgaggcaaacca
ggcgacatgggccctcccggtccccaaggccccccaggaaaggctgggcccacaggaatg
aagggtgaagacggacacgtggggagcccgggagaaaagggggagaaaggggagacgggg
caagcaggcccaccgggtctagacggcccaactggggagaaaggagaaccaggtggccaa
gggagacccggaacaacaggattgcccggcccgatcgggctcccgggatttacagttcct
gggcccccagggccagaggggcctcccggacctccgggactccaaggtgttcctggacca
aagggggaagcgggactggatggagcaaaaggagagaagggtgtccagggagagaaagga
gaccgagggccgctgggattacccggagcttcaggtttggacggcaggcctgggccaccg
ggtactccaggaccagtcggagttccaggcccagcgggaccaaagggcgagaggggcagc
aaaggcgaccttgggatgacaggaccatcaggagcggctgggcttcctggtttacatgga
ccacccggggacaaaggaaaccggggggagagggggaagaaaggctctagagggcctaaa
ggggataagggagaccaaggagcgcctggattagacgccccctgcccgttgggcgaagat
ggcttaccagtccagggctgttggaacaagaggcccacgccgcccgccggcactgtcgtt
attcctatggcgggagacttccaggatgtggcccttcccgagggatcctga
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