Puma concolor (puma): 112855857
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Entry
112855857 CDS
T08890
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoo03019
]
112855857 (NRDE2)
Messenger RNA biogenesis [BR:
pcoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112855857 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
DUF4778
ING
PNPase
Motif
Other DBs
NCBI-GeneID:
112855857
NCBI-ProteinID:
XP_025775163
UniProt:
A0A6P6HIB1
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MESGLPLSQSPLKSEPSDESDTNKKPKQTSRKKKKEKKKKRKHHHKKTRRKHGRSSSSGS
EPDSDSEKDKASRSIRDSKKESEKPNREGNAVADTGHRCVWLEDVQALTGETFRTDKKPD
PANWEYKSLYRGDIARYKRKGDSCLGINPKKQCISWEGAATEKKHSHKHVERYFTKKSVG
LMNVDGVAVGGKTEPPSSEPVSFIPVKGSDDVVPPVTTWLNPLGIYDQSTTQWLQGQGPS
EQESKRPDSQTDREHALLKAKVEEFNRRVRENPRDIQLWMAFVAFQDEVIKSPGLYAIEE
GEQEKRKRSLRLVLEKKLAILERAIESNQSSVDLKLAKLKLCSEFWEPSALAKEWQKLIF
LHPNDTALWQKYLLFCQSQFSTFTVSKIHGLYGKCLSTLSAVKDGSILSHPALPGTEDAM
FGLFLQQCHFLRQAGHSEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPR
VGEKGARGWRAWMHQQERGGWVVISPDDDDDEPEDEDQEIREKSLPRWQIWLATERSRDQ
RHWRPWRPDKTKKQTEEDCEDPERQVLFDDIAQSMIRLSSQDLQFQLVAAFLQFLGVPSG
LSPPASCLYLAMDENSIFDDGLHDEMPLTFLNLSSSGVSCVGCSDPLGRQRWTRGHNREG
EEFIRNIFHLVMPLFSGRERSQLCFSWLRYEIEKVIWCLHTKNKKRLKSQGKNCKKLAKN
LLKEPENRNSFCLWKQYAHLEWLLGNTEDARKVFDAALSMAGGRDLRDRELCELGLLYAG
LEAELLPDPRGAATARAVHVLTRLTEQGPCGPYSGQALAVHILKARKAYEHALQDCLGDS
CVSAPAPSDSFDRLTSLVKCFMLFQYLTVGIDAAVRVYEQVLAKLKGSVPPGGSGPEDGA
RAQGPHGVLEAVTLMHTSLLRFHTKVSLYPLAPLRQALSEALRLYPGNQVLWRAYVQIQS
RSHTASETRRFFDAVTRSTKLLEPWLFAIEAEKMRKRLVESVQRVDGREVHATIPETGLT
HRIRALFENALRSDNGSQCPLLWRMYLNFLVSLGDKERSKGVFYKALQNCPWAKVLYLDA
VEHFPEEMQEVLDLMTEKELRVRLPVEELALLLED
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggagtctggactccctctgagccagagccctctgaaatcagagccttcggatgaaagt
gacactaacaaaaagcccaaacaaacaagcagaaaaaagaagaaagagaaaaagaagaaa
aggaagcatcaccacaagaaaaccaggagaaaacatgggcggtccagtagcagtgggtct
gagccagatagtgattctgaaaaggataaagcttccagaagcattagagacagtaaaaag
gaatccgagaaacccaaccgagaagggaacgccgtcgctgatactgggcaccgctgcgtc
tggcttgaggacgttcaggctctcacaggggaaaccttcagaacagataagaaaccggat
cctgcaaactgggagtataagtctctctaccgaggagatatagcaagatacaagaggaaa
ggggactcctgccttggcattaaccctaagaagcagtgcatatcctgggagggggctgcc
acagaaaagaagcactcacacaagcatgtcgagcgctatttcacgaagaagagcgtggga
ctgatgaacgttgacggagtcgccgttggcggtaaaaccgaacctccctcatctgagccg
gtctcatttatcccagtgaagggctcggatgatgtggttcctcccgttacgacctggctg
aaccctctggggatttacgatcagtccaccacgcagtggttacaaggacagggtccttca
gagcaagaatcaaagcggccagactcacagacagacagagagcatgccctgctcaaggcc
aaggtggaggagtttaacaggagagttcgggagaatccccgggatattcagctgtggatg
gcatttgttgcttttcaggacgaggtcataaagagccctggcctgtatgccatcgaggaa
ggagagcaggaaaagcggaagcggtctctgaggctcgttctggagaagaagctggccatc
ctggagcgggccatcgaaagcaaccagagcagcgtggacctgaaactcgccaagctgaag
ctctgctccgagttctgggagccctccgccctggccaaagagtggcagaaactgatcttt
ctgcatcccaacgatacagccctgtggcagaaataccttttattttgccagagccagttt
agcacctttacggtgtcaaaaattcacggtctgtatggcaagtgcttgagcaccttgtct
gccgtgaaggacggcagcatcttatcgcaccccgccctgccaggcaccgaggacgccatg
tttggtctctttcttcagcaatgccacttcctgcggcaggctggtcactctgagaaggcg
gtctctctgttccaggccatggtcgacttcaccttcttcaaacccgacagtgtgaaagac
ctgcccaccaaaggacaggtggaattctttgagcccttctgggacagtggggagccccgg
gttggcgagaagggtgcccgaggctggagagcgtggatgcaccagcaggagcggggcggc
tgggtggtcatcagtccagatgatgatgatgatgagccagaagacgaggaccaggaaata
agagagaagagtctgcccaggtggcagatctggcttgccaccgagcggtcccgagaccag
aggcactggcggccgtggcgccctgataagaccaagaagcaaaccgaggaagactgtgag
gatccagagagacaggtgctgtttgatgacattgcccagtctatgatccgtctttccagc
caggatcttcagtttcagctggttgcggcctttctgcagttcctgggcgtgccttctggc
ctcagccctccagcctcctgcctctacctggccatggatgagaacagcatcttcgatgac
gggcttcatgacgaaatgccactgacttttctcaacctttcctcttccggtgtcagctgc
gttggctgctcagacccattgggccgccagcgctggacccggggtcacaatcgagagggc
gaggagttcatccgcaacatctttcaccttgtgatgcctttgttttcaggccgggagagg
tctcagctctgcttctcctggttacggtacgagatcgagaaggtcatttggtgtctgcac
actaaaaacaagaagaggctaaagtcacagggaaagaactgcaagaaactagccaaaaat
ctcctgaaggagccagaaaaccgcaacagtttttgcctctggaagcagtacgcacatctg
gagtggctgcttggcaacaccgaggacgccaggaaggtgttcgatgcggcgctcagcatg
gcggggggcagagacctgagggaccgtgagctgtgtgagctcggcctcctctacgccggg
ctggaggcggagctgttgccggacccgagaggggccgccacggcacgagccgttcacgta
ctgaccaggctgacggagcaggggccctgcgggccctactccgggcaggcgctggccgtt
cacatcttgaaagctcggaaggcgtacgaacacgcgctgcaggactgtttgggcgacagc
tgtgtgtccgctccggctcccagcgactccttcgaccgcctgactagcctggtgaaatgc
ttcatgctctttcagtacttgaccgtagggatcgacgcggccgtgcgggtgtacgagcag
gtgctcgcaaaactgaagggctctgttcccccagggggctccggcccggaggacggtgcc
cgcgcccagggcccccacggcgtgctggaggccgtgacgctgatgcacacgagcctgctc
aggttccacacgaaagtcagcctttaccccctggctcctctgcgacaggctctctccgag
gcgttaaggttgtacccaggcaaccaggtgctttggcgggcatacgtgcagattcagagc
aggtcccacacagccagtgagaccagaagatttttcgacgcggtcaccaggtctaccaaa
ctcttggagccttggttgtttgcgatcgaggccgagaaaatgaggaagagactggtggaa
agtgttcagagggtagatggtagagaggtccacgccacaattcccgagaccggcttgaca
catcgcatcagagccctgtttgaaaatgcgttgcggagcgacaacggcagccagtgcccc
ttactgtggaggatgtacctgaattttttggtttccttaggagacaaagaaaggagcaaa
ggcgtgttctacaaagcacttcagaattgtccctgggcgaaggtgctgtacctggatgct
gtggagcacttccccgaagagatgcaagaggtcctggacctgatgacggagaaggagctc
cgggtgcgcctgcccgtcgaggagctggcgcttctgctggaggactag
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