Puma concolor (puma): 112857268
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Entry
112857268 CDS
T08890
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112857268 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoo03019
]
112857268 (EDC4)
Messenger RNA biogenesis [BR:
pcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112857268 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
112857268 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
112857268
NCBI-ProteinID:
XP_025776348
UniProt:
A0A6P6HM44
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKSGIRAMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIQQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVRVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRSLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPHPTHT
AHEDFAFGESRPELGSEGLGSATQGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSTSLQQIAASPSNSNSNSNSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSP
KLQLDGSLTMSSSSSLQASPRSLLPSLLPGPADKLTPKAPGQVPTAASALSLELQEVEPL
GLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFVSSAPEGLEPDSMASAASALH
LLSPRPRPASELGSQLGLDGGPGDGDRHSTPSLLEAALTQEATAPDNQVWPTAPDITRET
CSSLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGT
KVPTPRLPAKDWKTKGSPRASPKLKRKGKKDDGDSAVGSRLMEHQVAEPPEDWPALIWQQ
QRELAELRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQDQRRLERALAEGQQRGG
QLQEQLTQQLSQALSSAIAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAV
EGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQI
NDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVR
AEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAA
HLDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPV
LLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEP
HNSLGKVARRLSLMLHGLVTPSLP
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcggccatctaatgcc
tacaatggagatctcaatgggcttctggtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagtctggtatccgggccatgccacctattaatcttcaggaaaagcaggtc
atctgcctctcaggagatgacagctctacgtgcattgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcaagcaaggcacggggcagcaacaaggtgaaa
atccagcctgtggccaagtatgactgggagcagaaatactactacggcaacctgattgct
gtgtccaactccttcttggcctatgccattcgggccgccaacaatggttcagcgatggtg
cgggtgatcagtgtaagcacttcggagcggaccctgctcaagggcttcacaggcagcgtg
gctgatctggcctttgcacacctgaattcctcacagctggcctgcctagatgaggcaggc
aacctgtttgtgtggcgcttggctctagttaatggcaaaattcaagaagagatcttggtc
cacatccagcagccagagggtacaccactgaaccacttccgtaggatcatctggtgcccc
ttcatccctgaggagagtgaggactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtgtgggacctggacatgctccgctccaaccacagcacctgg
cctgtgcgtgtcagccagatcaagcaaggcttcattgtggtcaaaggccatagcacgtgt
ctaagtgaaggggccctctcacccgatgggactgtcctggctactgcaagccatgatggc
tttgtcaagttctggcagatctacattgaggggcaggatgaaccaaggtgtctgcacgaa
tggaagcctcatgatgggaggtccctttcctgcctcctgttctgtgacaaccataagaaa
caggaccctgaagtccctttctggaggttccttattactggcgctgaccagaatcgagag
ctaaagatgtggtgcacagtgtcctggacctgtctgcagacaattcgtttctccccagat
atctttagctcagtgagtgtgccccccagcctcaaggtttgtctggacctctcagctgaa
taccttattctcagcgatgtgcaacggaaggtcctctacgtgatggagctgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccatcctgtg
ctgagcttcggcatccaggttgtgagtcgctgccggctgcggcacactgaagtgctacct
gctgaggaagagaatgacagcctaggggctgatggaacccacggagctggtgccgtggag
tctgcagctggtgtgctcatcaaactcttctgtgtgcatactaaggcattgcaagacgta
cagatccgcttccagccgcagctgaaccctgatgtggtggccccgcaccccacccacact
gcccatgaggactttgcatttggagagtctcggcccgaactgggctctgagggcctgggg
tcagctacccaaggctcccagcctgacctccgacgcatagtggagctacctgcacctgct
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acacctagcacctccctgcagcagattgctgcctcccccagcaacagcaacagtaacagc
aacagcagcagcagctccagctccagctcctcctctcttacagctgtgtctgccatgagc
agtacctcagctgtggatccctccctgcccaggccacccgaggagctgactttgagcccc
aagttgcagctggatggcagtttgacaatgagcagcagcagcagcctgcaggcaagcccg
cgtagcctcttgcctagcctgctcccaggtccagctgacaaactgactcccaaagcacct
ggacaggtgcctactgctgcttctgcactatcactggagctgcaggaagtggagcccctg
gggctaccccaggcttcccctagccgtacccgctcccctgatgttatctcctcagcttcc
actgccctgtcccaggacatccctgagattgcatctgaggccctctcccgtggttttgtc
tcctctgctcctgagggtcttgaaccagatagtatggcctcggctgcctcagcgctacac
ctgctgtccccacggccccggccagcgtctgagcttggctctcagcttggcctggatgga
ggccctggggatggggatcggcatagtaccccttcccttttggaggcagccttgacccag
gaagccacagcccctgacaatcaggtctggcctacagcaccagacattactcgtgagacc
tgcagcagcctggcagagagtcccaggaatggcctccaggagaagcacaagagcctggcc
ttccatcgaccaccttatcacctcctgcagcaacatgatagccaggatgccagtgctgag
caaagtgaccacgatgatgaagtggccagccttgcctctgctgcagggggctttggcacc
aaagttcccactccacggctgccagccaaggactggaagaccaagggatctcctcgagcc
tcacccaagcttaagagaaagggcaagaaagatgacggggattcagccgtaggatcccgg
ctcatggagcaccaggtggcagaacctcctgaagactggccagcactaatttggcaacag
cagagagagctggcagagctgcggcacagccaggaagaattgctgcagcgtctttgcacc
caacttgaaggcttgcagagcacagtcacgggccacgtagaacgcgccctagagtcacgg
catgagcaagaccagcggcggctggagcgggcactggctgaggggcagcagcggggtggg
cagctgcaggagcagctgacgcaacagctgtcccaggcactgtcttcagctatagctggt
cggctagagcgcagcatacgggatgagatcaagaagacagtgcctccatgtgtctccagg
agtttggagccagtggcaggccaactgagcaattcagtggccaccaagctcacagctgtg
gagggtagcatgaaagagaatatctccaagctactaaagtccaagaacttgacagatgcc
attgcccgagcagctgcagacacattacaggggccaatgcaggctgcctaccgtgaagcc
ttccagagcgtggtactgccagcctttgagaagagctgccaggccatgttccagcagatc
aatgatagcttccgactgggcacgcaagaatacttgcagcagctagagagccacatgaag
agccggaaggcacgagaacaggaagcacgggagcccgtgttggcccagctgcgaggcctg
gtcagcacactgcagggtgccactgagcagatggcagccactgtatccagcagcgttcgg
gctgaggtgcagcaccagctgcacgtggctgtgggcagcctgcaggagtcaattttagca
caggtacagcgcatcgttaaaggtgaggtgagtgtagcacttaaggagcaacaggccgcc
gtcacgtctagcatcatgcaggccatgcgttcagcagctggcacacctgtccccgctgcc
cacctcgactgccaggcccagcaagcccatattctacagctgctgcagcagggccacctc
aatcaggccttccagcaggccctgacggctgctgacctgaacctggtgctgtatgtgtgt
gaaactgtggacccagggcaggtttttgggcagccaccctgcccactctcccagcctgtg
ctcctttccctcatccagcagctggcctctgaccttggtactcgaactgacctcaagctc
agctacctggaagaggctgtgatgcacctggaccacagtgaccccatcactcgggaccac
atgggctccgtcatggcccaggtgcgccagaagctctttcagttcctgcaggctgagccg
cacaactcacttggcaaagtggcccggcgtctcagcctcatgctgcacggccttgtaacc
cctagcctcccttag
DBGET
integrated database retrieval system
