Puma concolor (puma): 112858239
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Entry
112858239 CDS
T08890
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo05016
Huntington disease
pcoo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
112858239 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
112858239 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoo03019
]
112858239 (HTT)
04131 Membrane trafficking [BR:
pcoo04131
]
112858239 (HTT)
03029 Mitochondrial biogenesis [BR:
pcoo03029
]
112858239 (HTT)
Messenger RNA biogenesis [BR:
pcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112858239 (HTT)
Membrane trafficking [BR:
pcoo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112858239 (HTT)
Mitochondrial biogenesis [BR:
pcoo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112858239 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_2
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
112858239
NCBI-ProteinID:
XP_025777400
UniProt:
A0A6P6HNJ0
LinkDB
All DBs
Position
Unknown
AA seq
3151 aa
AA seq
DB search
MTPAGSSEMQEGTKSKKTRTLLPSLPHPKQEVPYRHLWSSSLLEGDPLGSGSYCCGCHLW
GQSCSLLHQPQPPPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSL
RNSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNRVIKALMDSNLPRLQLELYKEIK
KNGAPRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAVPKI
MASFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVTICQHSRRTQYFYSWLLNVL
LGLLVPVEDEHSTLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVCPSTEQLI
QVYELTLHYTQHQDHNAVTGALELLQQLFRTPPPELLQALTAPGGGQRSGVQYGPGGRSR
SGSIAELLAGGGSSCSPVLSRKQKGKVLFGDAAALEDDSESRSEGSSPAFAASVKGEIGG
ELAASSGVSTPGSAGSTADSVGHDIITEQPRSQHTLQPDSVDLTGCDLASAATDGDEEDI
LSHSSSQISAVPSDPAMDLNDGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQ
YSGLQIGQPQDEDEEAAGVLPEEDVDAFRNSAAALQQAHLLKSMGHSRRPSDSSVDTFVS
RDEAAEAGDQENKPCRIKGDIGQSTDDDSVPLVHCVRLLSASFLLTGEKNVLVPDRDVRV
SVKALALSCVGAAVALHPESFFSKLYKVPLDSVEYPEEPYVSDILNYIDHGDPQVRGATA
VLCGTLISSTLSRSRFQVGDWMGTVRALTGNTFSLEDCIPLLRKTLKDESSVTCKLACTA
VRHCVMSLCSSSSSELGLQLITDVLSLRDSSYWLVRTELLETLAEIDFRLVSFLEAKAEN
LHRGAHHYTGLLKLQDRVLHDVVIYLLGDEDPRVRHVAAAALMRLVPKLFYKCDQGQADP
VVAVARDQSSVYLKLLMHETQPPSHFSVSTITRIYRGYNLLPSMTDVTVENNLSRVIAAV
SHELVTSTTRALTFGCCEALCLLSTAFPVCVWSLGWHCGAPPLSVSGESRKSCTVGMATV
ILTLLSSAWFPLDLAAHQDALVLAGNLLAASAPRSLRSSWTSEEEANPAAAKQEEVWPAL
GDRTLVPMVEQLFSHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKE
PGEQASAPLSPKKGSEASPASRQSDTSGPVTANKSSSLGSFYHLPSYLKLHDVLKATHAN
YKVTLDLQNSAEKFGGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMAT
VCVQQLLKTLFGTNLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQA
LADASLRNMVQAEQDHDASGWFDVLQKVSTQLKTNLTSTTKNRADKNAIHNHIRLFEPLV
IKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRE
SEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDL
FVLRGANKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKESEDKWKRLSRQ
IADVILPMLAKQQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMAPVSTV
QLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCPIINRLREGDSTSTPEEHSEG
RQMKSLPEETFSRFLLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKS
GMFRRITAAASRLLTVDSSDSSFYGLDRLNAQVRAMVPTHPALVLLWCQILLLVSHTDHR
WWAEVQQTPRRRSLSSTKSLGPQMSGEEGDSDAASKPGMCNREIVRRGALILFCDYVCQN
LHDSEHLTWLIVNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSAPTT
LKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAANLQSSMA
QLPVEELTRIQEYLQSSGLAQRHQRLYSLLDRLRLATAPGSRGPSPPVTSHPLDGDGPLA
LETVIPDKDWYLRLVKSQCWTRSDSALLEGAELVNRIPPSDMSTFMMNSEFNLSLLAPCL
GLGMREVSGGQRSPLFEAARLATLDRVTGLVQQLPAAHHVFQPFLPAEPTAYWNKLNDLF
GDAVLYRSLTTLARALAQYLLVFSKLPGHLHLPPEKERDTVKFVVMTLEALSWHLIHEQI
PLSLDLQAGLDCCCLALQLPSVWSALSSPEMVTHACSLIHCVRFILEAIVVQPGDQLLSP
DRRMNTPKAAREDEVDSNTQNPAYITAACGMVAEMVEALPSVLALGHKRNSSTPAFLTSV
LRNIIISLARLPLVNSYTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIY
RINTLGWTSRTQFEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVL
SAMTVPVAGNPAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENVATH
HLYQAWDPVPSLSPATTGALIGHDKLLLQINPERELGNMSYKLGQVSIHSVWLGNSITPL
REEEWEEEEEEEADVPTSASPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARR
TPIILISEVVRSLLVVSDLFTERTQFEMMYLTLTELRRAHPAEDEILIQYLVPATCKAAA
VLGMDKAVAEPVSRLLESTLRSNHLPSRVGALHGALYVLECDLLDETAKQLVPVISDYLL
SNLKGAAHCVNVHSQQHVLVMCATAFYLIENYPLDVGPEFSASVIQMCGVMLSGSEESTP
SIIYHCVLRGLERLLLSEQLCRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKE
KISPGRTSDPSPAAPDSESVIVAMERVSVLFDRVRKGFPCEARVVARILPQFLDDFFPPQ
DVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSSGQSSMVRDWVMLSLSNFTQRSPVAM
AVWSLSCFFVSASTSPWVSAVLPHVISRMGKLERVDVNLFCLVATDFYRHQIEEELDRRA
FQSVFEVVAAPGNPYHRLLTCLRNVHKVASC
NT seq
9456 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagctggaagctcggagatgcaggagggcacgaagagtaagaagacacggacc
cttctccccagcctgccccaccccaagcaggaggtgccctacagacatctgtggagcagt
agtctccttgaaggggacccgctgggatcgggcagttattgctgcgggtgccatctctgg
ggtcaaagctgctccttgctgcaccagccacagccgcccccgccgccgcccccgccgccc
cccggcccggccgtggccgaggagccgcttcaccgaccaaagaaagaactctcagccacc
aagaaagaccgtgtgaatcactgtctgacgatatgtgagaacatagtggcacagtcactc
agaaattctccagaatttcagaaacttctgggcatcgctatggaactcttcctgctgtgc
agtgatgatgcggagtcggatgtcaggatggtggctgacgagtgcctcaacagagtcata
aaagcgctgatggactcgaatcttccgcggttacagcttgaactctataaggaaatcaaa
aagaatggcgctccccggagcctgcgtgctgccctgtggaggtttgcggagctggctcac
ctggttcggcctcagaaatgcaggccttacttggtaaaccttttgccttgcctgactcga
ataagcaagagacccgaggaatctgttcaggagaccttggctgcagctgtacctaaaatc
atggcttcttttggcaattttgcaaatgacaatgaaattaaggttctattgaaggctttc
atagcgaatctgaagtcaagctcgcctaccattcggcgtactgcagctggctcagcagtg
accatctgccagcactccagaaggacgcagtacttctatagctggctactgaacgtactc
ctgggcttgctggttcctgttgaggacgaacactctaccctcctgattctcggagtgctg
ctcacgttgaggtatttggtgcccttgctgcagcagcaggtcaaggacacgagcctgaaa
ggcagctttggggtgacacggaaagaaatggaagtctgtccctcaactgagcagctcatc
caggtttacgaactgaccttgcattacactcagcaccaagaccacaacgccgtgactggg
gcgctggagctcctgcaacagctcttcaggacgccccctcccgagctcctgcaggccttg
accgcgccgggcggcgggcagcggagcggcgtgcagtatgggcccggcggccggagccgc
agcggcagcatcgcggagctcctagccggagggggttcttcatgcagccctgtcctttca
agaaaacaaaaagggaaagtgctcttcggagacgcagcagccttggaggatgactccgag
tccaggtcggagggcagcagccccgccttcgcagcctcagtcaagggtgagattggtggt
gagctggcggcctcttctggagtctccactcctggctccgccggttcaactgccgactcc
gtggggcacgacatcatcaccgagcagccccgctcacagcacacgctgcagccggactcg
gtggatctgaccggctgtgacttggcgagcgctgccaccgacggggatgaggaggacatc
ctgagccacagctctagccagatcagtgccgtcccgtctgacccagccatggacctgaac
gatggcacccaggcctcctccccagtcagtgacagttcccagaccaccaccgaagggccc
gattcggctgtgaccccttcagacagttctgaaatcgtgttagatggggccgacagccag
tattcggggttgcagattggacagccacaggacgaggatgaggaggccgcgggcgttctt
ccggaggaagacgtagatgctttccgaaactccgcagctgcccttcagcaagcacattta
ttgaaaagcatgggccacagccggaggccctccgacagcagtgtggatacgtttgtttca
agagacgaagctgccgaagcaggagatcaagaaaacaagccttgccggatcaaaggtgac
ataggacagtctaccgatgacgattctgttcctcttgtccattgtgtccgccttctgtcg
gcttcgtttttgctgactggggagaagaatgtgttggttccggacagggacgtgagggtc
agcgtgaaggcactggcactgagctgtgtgggagccgctgtggcccttcatcctgagtct
ttcttcagcaaactttacaaagtacctcttgactccgtggagtaccctgaggagccatat
gtgtcagacatcctgaactacatcgatcatggagacccccaggtcagaggagccacggcc
gttctctgtgggaccctcatctcctccaccctgagcaggtcccgcttccaagtgggagac
tggatgggcaccgttagagctctgacaggaaatacattttctctggaggactgcattcct
ttgctgcggaaaactttgaaggatgaatcttctgtcacttgcaagttggcctgcacagct
gtgaggcactgtgtcatgagtctgtgcagcagtagctccagtgaactgggactgcagctg
atcaccgatgtactgagcctgagggacagctcctactggctggtgaggacagagcttttg
gagacgctcgcagagattgactttaggttggtgagctttttggaggcaaaagcagaaaat
ctacacagaggggcccatcattacacagggcttttaaaactgcaggaccgagtgctccat
gacgtcgtcatctacttgcttggggacgaagaccccagggtgcgacacgttgccgcagct
gcactgatgaggcttgtcccgaagctgttttataaatgtgaccaaggacaggccgaccca
gtggtggctgtggcgagagaccaaagcagcgtttacctgaaacttctcatgcacgagact
cagcccccatctcacttctccgtcagcaccataaccagaatatacagaggctataaccta
ctgccaagcatgacagatgtcactgtggaaaataacctctcgagagtcattgcggcagtt
tcccacgagctggtcacgtcgaccacgcgagcacttacgttcggatgctgcgaggctttg
tgtcttctttccactgcctttccagtctgcgtttggagtttaggctggcactgtggggca
cccccgctgagcgtgtccggtgagtccaggaagagctgtactgttggcatggccacggtc
atcctcaccttgctctcgtcagcttggttcccgctggacctcgcagcgcaccaggatgca
ctggtgctggccggaaacctgctcgcagccagtgcccccagatctctgagaagttcgtgg
acctctgaggaagaggccaacccagcagccgccaagcaggaagaggtctggccggctctg
ggtgaccggaccctggtgcccatggtggagcagctcttctcccacctgctgaaggtgatt
aatatctgtgcacacgtgctggacgatgtggctcctggaccggcaataaaggcagccttg
ccgtccctaacaaaccctccttctctaagtccgatccgccggaagggaaaggagaaagag
ccgggagagcaggcctctgcgcccttgagccccaagaaaggcagcgaagccagtccagcc
tctcgacaatccgacacctcagggcctgttacagcaaataagtcctcatcactggggagt
ttctaccaccttccttcatacctcaaattgcacgatgtcctgaaagctactcacgctaac
tataaggttaccttggaccttcagaacagtgctgaaaagtttgggggctttctgcgttct
gccttggatgtgctctctcagatcctagaattggcaacactgcaggacatcgggaagtgt
gtcgaggagatcctaggctacctgaaatcctgtttcagtcgagaaccgatgatggcaact
gtttgtgttcagcagttgctgaagactctctttgggacaaacttggcctcccagtttgat
ggcttgtcttccaaccccagcaagtcccagggccgagcgcagcgtctgggctcctccagc
gtgaggccgggcttgtaccactactgcttcatggctccctacacccacttcacccaggcc
ttagccgacgccagcctgaggaacatggtgcaggcagagcaggaccacgacgcctcaggg
tggtttgacgtgcttcagaaagtgtctacccagttgaagacgaacctcaccagcaccact
aagaaccgcgcagataagaatgctattcacaatcacattcgtttgttcgagcctctggtt
ataaaagctttaaagcagtacacaaccacaacgtctgtgcagctacagaggcaggtctta
gatttgctggcacagctggttcagttacgggtcaattactgtcttctggattcagatcag
gtgtttattggatttgtgctgaagcagttcgaatacattgaagtaggccagttcagggaa
tcagaggcaattattccaaacatctttttcttcctggtattactgtcttacgagcgctat
cattcaaaacagatcattggaatccctaaaatcattcagctctgtgacggcatcatggcc
agcgggaggaaggctgtgacacatgccataccggctctacagccgatagtccatgacctg
ttcgtactgagaggagccaataaagctgatgcaggaaaagagcttgaaacccagaaagaa
gtggtggtgtccatgctgctgagactcatccagtaccatcaggtgctggagatgttcatc
ctggtcctgcagcaatgccacaaggagagcgaggacaagtggaagcggctgtcccggcag
atcgccgacgtcatcctcccgatgttggccaagcagcagatgcacattgattctcacgag
gcccttggcgtgttaaatactttatttgagattctggccccttcctccctccgtcccgtg
gacatgcttttacggagtatgttcgtcactccggacacaatggcacctgtgagcactgtt
cagctgtggatatcaggaatcctagccattttgagggttctcatttcccagtcaactgaa
gacattgttctttctcgtattcaggagctctctttctctccatatttaatctcctgtccg
ataattaataggctaagagagggggacagtacttcgacaccagaagaacacagtgaaggg
agacaaatgaagagcttgccggaagaaacattttcaagatttctactacagctagttggc
attcttttggaggatattgttacaaagcagctcaaagtggaaatgagtgaacagcaacac
actttctactgccaagaactgggcactctgctgatgtgtctcatccacatcttcaagtct
ggaatgttccgtaggatcacagcagccgcctccagactcctcacggtggacagcagcgac
agcagcttctacggcctggacaggctgaacgcgcaggtgcgcgccatggtgcccacgcat
ccggcgctcgtgctgctctggtgccagatcctgctgctcgtcagccacaccgaccaccgc
tggtgggcagaggtgcagcagacccccaggagacgtagtctgtccagtacgaagtcactc
ggcccccagatgtccggagaggagggggactccgacgcggccagtaaacccggaatgtgc
aacagagaaatagtgcggcggggagctctcattctcttctgcgattatgtctgtcagaac
ctacacgattcagagcacttaacgtggctcatcgtgaatcatattcaggacctgatcagt
ctgtcccatgagcctcccgtgcaggatttcattagtgctgttcaccggaactccgccgcc
agtggcctcttcatccaggcaattcagtctcgttgtgagaacctttcagcccccaccacc
ctgaagaagacgcttcagtgcttggaagggatccacctcagccagtcaggcgccgtgtta
acactgtatgtggacaagcttttgtgcaccccgttccgagtgctggctcgcatggtcgac
acccttgcctgtcgccgcgtggaaatgcttttggccgcaaatttgcagagcagcatggcc
cagttgccggtggaggaactaaccagaatccaggaataccttcagagcagcgggctggct
cagagacaccagaggctgtactccctgctggacaggcttcgtcttgctaccgcaccgggc
tcccgtggcccttctcctccagtcacgtcccacccgctggacggggatgggcccctggca
ctggagacagtcattccagacaaagactggtacctacgtctagtcaaatcccagtgctgg
actaggtcagattctgcgctgctggaaggggcagaactggtgaatcggattcctcccagt
gacatgagcacgttcatgatgaactcggaattcaacttaagcctgttggcgccgtgcctg
ggccttggcatgcgcgaagtctccggaggccagaggagtccacttttcgaagcagctcgc
ctggcgactctggaccgtgtgaccggcctggtgcagcagctccctgccgcccaccacgtt
ttccagccgttcctgcccgcagagcccaccgcctactggaacaagttgaatgatctattt
ggggatgctgtgttgtatcgctccttgaccactctggcccgggctctggcccagtacctg
ctggtattctccaaactgcccggccacttgcaccttcctcctgagaaggagagggacacg
gtgaagtttgtggtcatgaccctcgaggccctgtcgtggcatttgatccatgagcagatc
ccgctgagtctggaccttcaggcgggcctggactgctgttgcctggccctgcagctgccc
agcgtctggagtgcactctcctccccagagatggtgacccacgcctgttctctcatccac
tgtgtccgcttcatcctggaagccattgtggtgcagcctggggaccagcttcttagtcca
gaccgaaggatgaacaccccaaaggctgccagagaggacgaagtagattcaaacacacaa
aacccggcctatattaccgcagcctgtgggatggtggcagaaatggtggaggctttgccg
tcggtgttggccttgggccataaaaggaatagcagcaccccagcgtttctcacatcggtg
ctcaggaacatcatcatcagcctggctcgcttacccctcgtcaacagctacacgcgcgtc
ccccccctggtttggaaacttggatggtcacccaaaccgggaggggattttggtacagcg
tttcctgagatcccagtggagttcctccaggagaaggaggtctttaaagagttcatctat
cgcatcaacactctagggtggaccagccgcacccagtttgaggaaacgtgggccaccctc
ctcggtgtcctggtgactcagcccctcgtgatggagcaggaggagagcccgccggaagaa
gacacggagaggacccagatcaacgtcctggccgtgcaggccatcacctcactggtgctg
agtgcgatgactgtgcccgtggccggcaacccggccgtgagctgcctggagcagcagccc
cggaacaagcccctgaaagctctcgacaccaggtttgggaggaagctgagcattatcaga
ggaattgtggagcaagaaatccaagcaatggtttcgaagagagagaacgtcgccacccat
cacttgtaccaagcgtgggaccccgtcccttctctctctccagccactacaggtgccctc
attggccacgacaagcttctgctgcagatcaaccctgagcgggagctggggaacatgagc
tacaagctcggccaggtgtccattcactccgtgtggctggggaacagcatcacgcccctg
agagaggaagagtgggaggaggaggaggaggaggaggccgacgtccccacgtctgcatca
ccacccacatcgccggtcaactccaggaagcaccgggctggagtcgacatccattcctgt
tcccagtttttgcttgaattgtatagtcgctggatcctgccgtcagggtcagccagaagg
acccccatcatcctgatcagcgaagtggtccgatctctcctagtggtctcagacttgttc
actgagcgcacccagtttgagatgatgtatctgacgctgaccgagctgaggagggcgcac
cctgcagaagacgagattctcattcagtacctggtccctgccacctgcaaggcggctgcc
gtcctcggaatggacaaggccgtggccgagcccgtcagccggctgctggagagcacactg
aggagcaaccacctgcccagcagggtcggggccctgcatggcgccctctacgtgctggag
tgtgacctcctggatgagacagcgaagcagcttgtccctgtcatcagcgactacctcctg
tccaacctcaaaggggcagcccactgcgtgaatgttcatagccaacagcacgtgctggtg
atgtgtgccaccgccttctacctgattgagaactatcccctggacgtaggcccagaattc
tctgcgtcggtaattcagatgtgtggggtgatgctgtccgggagtgaggagtccactccg
tccatcatttaccactgcgtcctgcggggcctggagcgtcttctgctctccgaacagctg
tgccggctggatgctgagtccctggtcaagctgagtgtggacagagtgaacgtgcacagc
ccgcaccgggccatggctgccctgggcctgatgctcacctgcatgtacacagggaaggag
aaaatcagcccaggcagaacctcagaccccagccccgccgccccagacagcgagtccgtg
atcgtggctatggagcgtgtgtccgttcttttcgacagggtcaggaaaggattcccctgt
gaagccagagtggtggcacggatccttcctcagtttttagatgacttcttcccaccccag
gatgtcatgaacaaagtcattggggaatttctgtccaaccagcagccatacccacagttc
atggccaccgttgtgtacaaggttttccagaccctgcacagcagtgggcagtcgtccatg
gtccgggactgggtcatgctgtccctctccaacttcacccagaggagcccggtggccatg
gctgtgtggagcctctcctgcttcttcgtcagtgcttccactagcccctgggtctccgcc
gtccttccccacgtcatcagcaggatgggcaagctggagcgagtggacgttaacctcttc
tgcctggtggccacagacttttacagacaccagatagaggaggagctggaccgccgggcc
ttccagtccgtgttcgaggtggtcgcggctccgggaaacccataccatcgactgttgact
tgtttgcggaacgtccacaaagtcgcctcgtgctga
DBGET
integrated database retrieval system
