Puma concolor (puma): 112859628
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Entry
112859628 CDS
T08890
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04140
Autophagy - animal
pcoo04211
Longevity regulating pathway
pcoo05010
Alzheimer disease
pcoo05014
Amyotrophic lateral sclerosis
pcoo05016
Huntington disease
pcoo05017
Spinocerebellar ataxia
pcoo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112859628 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
112859628 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
112859628 (RB1CC1)
05014 Amyotrophic lateral sclerosis
112859628 (RB1CC1)
05016 Huntington disease
112859628 (RB1CC1)
05017 Spinocerebellar ataxia
112859628 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
112859628 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcoo01009
]
112859628 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoo04131
]
112859628 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
pcoo03029
]
112859628 (RB1CC1)
Protein phosphatases and associated proteins [BR:
pcoo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112859628 (RB1CC1)
Membrane trafficking [BR:
pcoo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
112859628 (RB1CC1)
Mitochondrial biogenesis [BR:
pcoo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112859628 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Jag_N
Motif
Other DBs
NCBI-GeneID:
112859628
NCBI-ProteinID:
XP_025778687
UniProt:
A0A6P6HSA0
LinkDB
All DBs
Position
Unknown
AA seq
1593 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTEL
VLSPDMPRTTNQSLLTSFHKSVEHVAPDTADAESGKEMRESCQSTVPQDETSVDAKDGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKL
FRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQVSPQSASSPRIESTAG
IATTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
LCGKEDLGDRASLNVQLEKCRLVAQDSHFSIQTIKKDLCHFRTFVQKGQCDFSNSLKCTA
LEIRNVIEKVRYSLEMTLNEKHQKELQSLKSEYEDRLAALRKESEENENKIKKLKGDLAC
LEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMESLMRTQSCEIDELKHSRETVLED
LQKLHVENDEKIQLLRTELQGLEQRHLKELEDALHARHMQEVEKAKTDHGASLEKLKKEN
QHRIDQIQESHAAAIQEKEQQLQELKLKVSDLSDVRCKLEVELALKEAETDEIKILLEES
RAQQKETLKSLLEQETENLRTEISKLHQKIQDNNESYQVGLAELRTLMTIEKDQCISELI
SRHEEESDLLKAELNQVTSLHHQAFEVEKNLKEEIAELQSKLDAELSALEKQKEEKLTQQ
EEKYEAIIQKLEKDKEKFVMSQEQDRERLIQKLNCEKEEAIQTALKEFKLEREAVEKELL
EKVKHLENQIVKSLATESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLNDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKKLEEEVSKLRGGSFVPSPYVAAAPELYGACAPELPGEPERSGPETQDEGKADSAMETS
TMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDF
QVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVME
KEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggttaacactggaactaccctgacatttgacactgaactt
acagtgcaaactgtggcagacctcaagcatgccattcacagcaaatacaagattgctatt
cagcatcaggtgctggtggtcaacggaggagaatgcatggctgcggaccgaagagtgtgc
acctacagtgctgggacggacacaaatccgatttttctttttaacaaagagatgatctta
tgtgatcgtccacccgctattccgaaaacgaccttttcgacagaaaatgacatggaaata
aaagttgaagaatctcttatgatgcctgcagtttttcacaccgttgcgtcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactttgctctttctgtgagggtctggtc
catgatgaacaccttcaacaccaaggctgggctgcaatcatggccaatctggaggactgt
tcaaattcttaccaaaagctacttttcaagtttgaaagtatttattcaaattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtcatggcc
aagattcctctgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttgcctgaacatgaaggctcagaaaaggctgaaatgaaaacctccactgaactg
gtgctctctcctgatatgcctagaacaactaaccagtctttgttaacctcatttcacaag
tcagtggaacacgtagccccagataccgcagatgctgaaagtggaaaagaaatgagggaa
tcttgtcaaagtactgtcccgcaggatgaaacttcagtagatgctaaagacggtgatctg
cctttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtg
gaatcattggtcaggaaatgctttgattccatgagcagacttgatccaaggattattcga
ccatttatagcagaatgccgtcaaactattgccaaacttgataatcagaatatgaaagcc
attaaaggacttgaagaccggctctatgccctggaccagatgatcgctagctgcagccga
ctggtgaatgaacagaaggaactcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtattacctgatttgtgcctgagtcacgcaaatcagttgatg
attatgttgcaaaatcatagaaaactgttggatattaaacagaagtgtaccactgccaaa
caggagctggcaaataacctacatgtcagactgaagtggtgttgctttgtgatgcttcat
gctgatcaagacggagagaaattgcaagctttgctccgcctcgtaatagaactgttagaa
agagtcaaaattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgtt
gaggttgtaaggagaaaaatgttcattaaacactacagggagtgggctggtgctttggtc
aaagatggaaagcgattatacgaagctgaaaagtcaaaaagggaatcctttgggaaattg
tttaggaagtcctttttaagaaatcgtctgtttaagggattggactcctggcccccgtcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ctacagtttctgcaatcattttgtccttcagaagttcagccattcctcagggttccctta
ctttgtgattttgaacctctacaccagcatgtacttgctctacacaatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctactgagtgaacaaaaggca
tccatgagtcaggtatccccacagtcggcttcctcaccaaggatagaaagtacagcagga
attgcaactactacctcaccgagaactcctcctccgctcgccgttcaggatcccttgtgt
cccgcggtgtgtcccttagaagaattgtctccagatagcatcgatgcacatacctttgat
tttgaaactatccctcatccaaacatagaacagactattcatcaagtttcattggactta
gattcattagcagaaagtcctgaatcggattttatgtctgctgtgaatgagtttgtaata
gaagaaaatttgtcatctcctaatcctataagtgatccacagagtccagaaatgatggtg
gaatcgctttattcatcagtcatcaatgccatagacagtagacggatgcaggatacaaac
ttatgtgggaaagaggatttaggagatcgtgcttctctaaatgtccaattggaaaagtgc
cgacttgttgcccaagactcacatttcagtatacagaccatcaagaaagacctttgccac
ttcagaacatttgtccagaaaggacagtgtgacttctcaaattctttaaaatgtacagca
ttagaaataagaaacgttattgaaaaggtaagatattctctggaaatgacactaaatgaa
aaacaccaaaaagaactgcagtctttaaaaagtgagtatgaagacagacttgctgcactc
agaaaggagagtgaggaaaatgaaaacaaaattaaaaagctgaaaggagacttggcgtgc
ctcgaggaggttttacaaaacaaagataacgaatttgctctggttaaacatgaaaaagaa
gccgtcatctgcctgcaaaatgagaaggatcagaagttgctggagatggaaagtctcatg
cgcactcagagctgcgaaatcgacgagctgaaacactcgcgggagaccgttctggaagac
ctgcagaagctccacgtggaaaatgatgagaagattcagttgttgcggacggagctccag
ggcttagagcagcgtcacctcaaggagctcgaggacgctctgcatgccaggcacatgcag
gaggtcgagaaggctaagaccgaccacggggcgtctttggagaaattgaagaaggagaat
cagcacagaatcgaccagatccaggagtctcatgccgccgctatccaggagaaagaacaa
cagctccaggaattaaaactcaaagtttccgatctgtcggacgtgagatgtaagttagag
gttgaacttgcattgaaggaagcagaaaccgatgaaataaaaattttactggaagaaagc
agagcccagcagaaggagaccttaaaatctctccttgaacaagagacggaaaatttgaga
acagagataagtaaactccaccaaaagattcaggataataacgaaagctaccaggtgggc
ttggcagaactaagaactttaatgaccattgaaaaagatcagtgcatttcagagttaatt
agtagacacgaagaagaatctgacctgctgaaagctgaattaaaccaagtaacatccttg
caccaccaagcatttgaagtggaaaaaaacctgaaagaagaaatagctgaactgcagagt
aaactggatgcggaattgagtgctcttgaaaagcaaaaagaggaaaaactcacccagcag
gaagagaagtatgaagctattatccagaaacttgagaaggacaaagagaaatttgtcatg
agccaggaacaagacagagaacggttaattcagaagcttaattgtgaaaaagaagaagct
attcagactgccctaaaggagtttaaattggagagagaagctgttgagaaagagttacta
gaaaaagttaaacatcttgagaatcaaatagtaaaaagtcttgccactgaatctaccaga
gaagattcttcaagcctagtcgctgaacttcaagaaaagcttcaggaagaaaaagcaaag
tttctagaacaacttgaagagcaagagaaaagaaagaatgaagaaatgcagaatgttcga
acatctctgattgctgaacaacagaccaactttaacactgttttaacaagagagaaaatg
agaaaagaaaacataatcaacgatcttaatgataagctgaaaagtacaatgcaacagcaa
gagcgagataaagatctgatagagtcgctgtctgaagatcgagctcgattgcttgaggaa
aagaaaaaactggaggaagaagtcagcaagctgcgcggcggcagttttgttccctcgccc
tacgtagccgcggccccggaactttacggagcatgcgcaccggaactgcccggcgagcca
gagaggtcaggcccggaaacgcaagacgaaggcaaagccgactcggcgatggagaccagc
acgatgtctgtacaagaaaatatccatatgctctctgaagaaaaacagagaataatgctg
ttagaacgaacattacaattgaaagaagaagaaaacaagcggttaaatcaaagactgatg
tctcagagcatgtcttcggtatcctcaaggcattcggaaaagatagctattagagatttt
caggtgggagatttggtgctcatcatcctggacgagcgccatgacaattacgtgttattt
accgttagtccaaccttgtatttcctgcattcggagtctctgcctgccctggatctgaaa
ccaggtgagggtgcttcaggtgcatctcgaagaccctgggtacttggaaaagtaatggaa
aaggaatactgtcaagccaaaaaggcacaaaaccgattcaaggttcctctggggacaaag
ttttacagagtgaaagctgtgtcatggaataagaaagtataa
DBGET
integrated database retrieval system
