Puma concolor (puma): 112860680
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Entry
112860680 CDS
T08890
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03440
Homologous recombination
pcoo03450
Non-homologous end-joining
pcoo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112860680 (RAD50)
03450 Non-homologous end-joining
112860680 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
112860680 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoo03032
]
112860680 (RAD50)
03400 DNA repair and recombination proteins [BR:
pcoo03400
]
112860680 (RAD50)
DNA replication proteins [BR:
pcoo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
112860680 (RAD50)
DNA repair and recombination proteins [BR:
pcoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
112860680 (RAD50)
BRCA1-C complex
112860680 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
112860680 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
AAA_15
SMC_N
AAA_29
DUF2703
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
112860680
NCBI-ProteinID:
XP_025779729
UniProt:
A0A6P6HVG1
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLISSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLIDCQRELEKLNKESRLLNQEKSELLVEQVLAVVIMVYL
TSLVFTYNWKSNDFAEKETMKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELRNVKYEL
QQLEGSSDRILELDQELSKAERELSKAEKNSNVEALKTEVISLQSEKADLDRTLRKLDQE
MEQINHHTTTRTQMEMLTKDKSDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKS
KEINQTRDRLAKLNKELASAEQNKNHLNNELKRKEEQLSSYEDKLFDVCGSQDFESDLDR
LKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSK
LRLAPDKLKSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRL
KNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLGRT
VQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRR
QQLEEQTVELSTEVQSLFREIKDAKEQLSPLETTLEKFQQEKEELINKKNASNKIAQDKT
NDIKEKVKNIHGYMKDIENYIQDGKDEYKKQKENELNKVIAQLSECEKHKENINKEMGIM
RQDIDTQKIQERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNDHQKLEEKI
DNIKRNHSLAIGRQKGYEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIY
YKTLDQAIMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNY
RVVMLKGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIES
LAHALVEIIKSRSQQRNFQLLVITHDEDFVELLGRSKYVEKFYRIKKNIDQCSEIVTCSV
SSLGSYVH
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggattgaaaagatgagcattctgggtgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttatagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacgctgcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatttgaagcaaaacaaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagctcagttaatatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctttctaaaataatgagacttgacaatgaaatcaaagccttggatagccgaaagaag
cagatggaaaaagataatagtgaactggaacagaagatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtgagggagaaagaaagg
agactgatagactgtcagcgtgaactggaaaagttaaataaagaatcaagacttctcaat
caggaaaaatcagaactgcttgttgaacaggtgttagctgtggtcatcatggtgtacctt
acatccctagtatttacatataactggaaatctaatgactttgcagaaaaagagactatg
aaacaaaaacagattgatgagataagggataagaaaactggactgggaagaataattgag
ctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaatgtgaagtatgaatta
cagcagttggaaggatcttcggacaggattcttgaactggaccaggagctctcaaaagct
gaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagctctaaaaacagaagta
ataagccttcaaagtgagaaagcagacctagacaggaccctgcgtaaattggaccaagag
atggaacagataaaccatcatacaacaacacgtacccagatggagatgctgaccaaagac
aaatctgacaaagatgaacaaatcagaaagataaaatctcgacacagtgatgaattaact
tcattgttagggtattttcccaacaaaaagcagcttgaagactggcttcatagtaagtca
aaagaaattaatcagaccagggacagacttgccaaattgaacaaagaactagcttcagct
gagcaaaataaaaatcacttaaataatgaactaaaaaggaaagaagagcagttgtccagt
tatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagtgatttagacaga
cttaaggaagaaattgaaaaatcctcaaaacaacgagccatgctggctggagccacggca
gtttactcccagttcattactcagctaacggatgaaaaccagtcatgttgccctgtctgt
cagagggtttttcagacagaagctgaattacaggaagtcatcagtgatttacagtctaag
ctgcggcttgctccagataaactcaagtcaacagaatcggaactaaagaaaaaagaaaaa
cggcgtgatgaaatgctgggacttgtccccatgaggcaaagcataattgatttgaaggag
aaggaaataccagaattaagaaacaaactgcaaaatgtcaacagagacatacagcgctta
aagaatgacatagaagaacaggaaacactcttgggcacaataatgcctgaagaagaaagt
gctaaagtatgcctgacagatgttacaattatggaaagattccagatggaacttaaagat
gttgaaagaaaaattgcacagcaagcagctaagctgcaaggactagacttgggtagaact
gtccagcaagtaaaccaggagaaacaagaaaaacaacacaagttagatacagtttccagt
aagattgaattgaatcgtaagcttatacaggaccagcaggaacagattcaacacttaaag
agtacaacaaatgaactgaagtcagagaaacttcagatatccactaatttacaacgtcgt
cagcaactggaggagcagactgtggaattatccactgaagttcagtccttattcagagag
ataaaggatgctaaagagcagttaagccctttagaaacaacattggagaagttccagcag
gaaaaagaagaattaatcaataaaaaaaatgcaagcaacaaaatagcacaggataaaacg
aatgatatcaaagagaaagttaaaaatattcatggttatatgaaggatattgagaattat
attcaagatgggaaagatgagtataagaagcaaaaagaaaatgaactcaataaagtgata
gctcaactaagtgaatgtgagaaacacaaagaaaatataaataaagagatgggaatcatg
agacaagatattgacacacagaagatacaagaaagatggctacaagataaccttacttta
agaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacagcatttgaaggaa
atgggtcaaatgcaggtcttacaaatgaaaaatgatcatcagaaattggaagaaaaaata
gataatataaaaagaaatcacagtttggcaatagggcgacagaaaggttatgaggaagaa
attatacattttaagagagaacttcgagaacctcaatttcgggatgcggaggaaaagtac
agggaaatgatgattgtcatgagaacaacagagcttgtgaacaaggatctggacatttat
tataagacccttgaccaagcaatcatgaaatttcacagtatgaaaatggaagaaatcaac
aaaattattcgtgacctttggcgaagtacctatcgtggacaagatattgaatacatagaa
attcggtctgatgccgatgaaaatgtatcagcctctgataaaaggcggaattataactac
cgagtggtgatgctgaagggagacacagccttggatatgcgaggacgatgcagtgctgga
cagaaggtattagcctcactcatcattcgtctggccctggctgaaacattctgcttgaac
tgtggcatccttgccctggatgagccaacaacaaatcttgacagagaaaatattgaatct
cttgcacatgctctcgttgagataataaagagtcgctcgcagcagcgtaacttccagctt
ctggtaatcactcacgatgaggattttgtggagctcttagggcgttctaaatatgtggag
aaattctacaggattaagaagaacattgatcagtgctcagagattgtgacatgtagtgtt
agctctctaggttcttatgttcattaa
DBGET
integrated database retrieval system
