Puma concolor (puma): 112860723
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Entry
112860723 CDS
T08890
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03013
Nucleocytoplasmic transport
pcoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112860723 (UPF3A)
03015 mRNA surveillance pathway
112860723 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoo03019
]
112860723 (UPF3A)
Messenger RNA biogenesis [BR:
pcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112860723 (UPF3A)
mRNA cycle factors
P-body specific factors
112860723 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
112860723
NCBI-ProteinID:
XP_025779760
UniProt:
A0A6P6HVB2
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MRSEKEGAGGPGAAVAARGPSGREKPSAVEVQFRRESPRREPEAPPASFFVCGDGICKHR
EEKKTVLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFFTADFSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKF
LETYCVEEEKTNANPETLLGDMEAKTRELIARRTTPLLEYIRNRKLEKQRIREEKREERR
RRELEKKRLREEEKRKKRDEERCKRKEADKQKRTAEREVRIKLLKKPEKGEEPTTEKPKE
RGEEMDTRDGEQESSPGCAVRKPMPLGISLEEPREKSQNESNEEQRELDRRFREKDPETQ
RCHLDDSRKQRAHCEFDTFSRRNEEELRWGKGGPPDRGKKGSQDSGNAVEAAERPGKEQR
SEGGPAAKMERPGNKDRPALQLYQPRVRIRAREGGRGTSVECPGRNKDEAEDSAQGGSQK
SEEAG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcagagaaggagggggccggaggcccaggcgctgccgttgctgcgcggggcccg
agcgggagggagaagccgtcggccgtggaagtccagttccgccgggagtcgccgcggcga
gaacccgaggcgccaccagcctcgttcttcgtttgcggggacggcatttgcaaacatcgc
gaggagaagaaaacggtcctgagcaaggtggtcatccgacggcttcctcccagcctcacc
aaggagcagctggaagagcagctacacccactgccggcacatgattactttgagttcttt
actgccgatttcagtctttatcctcatctctactcaagagcatacattaattttagaaat
cctgatgacatccttctttttagagatcgttttgatggatatatcttcattgacagtaaa
ggcctagaatatcctgcagtggtagagtttgccccattccagaagatagccaaaaagaag
ctaaagaaaaaagatgccaaaaccggaagcattgaagatgatccggaatacaagaagttt
ttggaaacttactgtgtggaggaagagaaaacgaatgccaatcctgaaactcttctggga
gacatggaggcaaagacaagagagcttattgctagaagaaccacacctcttttggaatat
attagaaatagaaaattagagaagcagaggattcgagaagagaagcgagaagagcgaagg
aggagggagctggagaagaagcgcttacgggaagaagaaaagagaaaaaagagagatgag
gagaggtgtaagagaaaagaagcagacaaacagaagagaacagcagagagagaagtaagg
attaagcttcttaagaaaccagaaaagggagaggaaccaaccactgagaagccaaaagaa
agaggagaggaaatggatactagagatggagaacaggagtcctctcctggctgtgctgtc
cggaagcccatgcccttggggatctcgctggaggagcccagggaaaagtcacagaatgag
agcaatgaagagcaaagggagttggaccgaagattcagagaaaaagaccctgaaacacaa
agatgccacttggatgacagtagaaagcagagagctcactgtgagtttgacacgttttcg
cggagaaatgaggaggagctgagatgggggaaaggaggcccccccgacagagggaagaag
gggagccaggacagtggcaacgctgtggaggcagcagagcggcccgggaaagagcagagg
agtgaaggtggcccagcagccaaaatggagcgcccaggaaacaaggatcggccggccttg
cagctgtaccagccaagagttcgcatccgagcacgagaaggtggtaggggaacctctgtg
gagtgccctggcaggaacaaggatgaggctgaagattcagcacaggggggttcccagaag
agcgaagaggcggggtga
DBGET
integrated database retrieval system
