Puma concolor (puma): 112861626
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Entry
112861626 CDS
T08890
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pcoo
Puma concolor (puma)
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoo03021
]
112861626 (CHD1)
03036 Chromosome and associated proteins [BR:
pcoo03036
]
112861626 (CHD1)
Transcription machinery [BR:
pcoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
112861626 (CHD1)
Chromosome and associated proteins [BR:
pcoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
112861626 (CHD1)
SLIK complex
112861626 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
112861626
NCBI-ProteinID:
XP_025780793
UniProt:
A0A6P6I0B4
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQTGSSDSESGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQHQASSNSGS
EEDSSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDY
EPKNKVKSRKPQNRSKAKNGKKILGQKKRQLDSSEEEDDEEDYDNDKRSSRRQATVNVSY
KEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGD
PNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECS
WEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRETIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTF
RISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEA
QRLSGAGGSKRRKARAKKNKALKSVKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNK
KIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKRELKEKEDKKDLKEKDFKEKRE
NKVKEAIQKEKDIKEEKLSESKSDSKERSKKSSVSDAPVHITASGEPVPISEESEELDQK
TFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIK
QWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSSLNAQVIRNPDVERLKE
NTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYK
QESRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRASSEYTHH
KSSRDYRYHSDWQMDHRPSSSGPRSPLDQRSPYGSRSPFEHSVEHKSTPEHTWSSRKT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagcgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctctggatctggttcaagttctggaagcagtagt
gatggaagcagtagccaaacaggtagcagtgactctgaatctggatctgaatcgggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcagcagcagcagcagcatcaagcttcatctaatagtggatca
gaagaggattcttccagcagtgaagattctgatgactcatcaaatgaagtcaaaaggaaa
aaacataaagatgaagattggcaaatgtctgggtcaggatctccatctcaatctggctca
gattcagaatctgaagaagaaagagataaaagcagttgtgatgaaacagaatctgattat
gagccaaaaaacaaagttaaaagcaggaaacctcaaaatagatctaaggcaaagaatgga
aagaaaattcttggacaaaaaaagagacagcttgattcatctgaggaggaggatgatgaa
gaagattatgataatgataaaagaagttctcgtcgccaagcaactgtcaatgttagctat
aaagaagatgaagaaatgaaaacagattccgatgacctactggaagtctgtggggaggat
gttcctcaacctgaggaagaggaatttgaaacaatagaacgttttatggattgtcggatt
gggagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgac
ccaaatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatgg
aaaggatggtctcatatccacaatacttgggagacagaagaaacccttaagcagcagaat
gttagaggaatgaaaaaattggataattataagaaaaaagatcaggagacaaaaagatgg
ttgaaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttacagat
gatctacacaaacagtatcaaatagtggaacgaataattgctcattccaatcagaagtca
gcagctggttatcccgattattattgcaaatggcagggccttccatactcagagtgcagc
tgggaggatggagccctaatttccaaaaagtttcaagcatgcatagatgagtattttagc
aggaatcaatcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaaga
tttgtagccctaaagaagcagccatcctacattggaggacatgagagtttagaattaaga
gattatcaactaaatggtttaaattggcttgctcattcttggtgcaaaggaaatagttgc
atacttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactat
ttgtttcatgagcatcaattatatggaccttttctgttagtagtaccactctccactctt
acttcctggcaaagggaaattcagacatgggcttctcagatgaatgctgtggtctattta
ggtgacattaacagcagaaatatgataagaactcatgaatggatgcatccccagaccaaa
cggttaaaatttaatatacttttaacaacttatgaaattttattgaaggataaggcattc
cttggaggtctgaattgggcgtttataggtgtagatgaagcacatcgattaaagaatgat
gactctcttctgtataaaactttaatagactttaaatccaatcaccgtctccttattact
ggaactcctctacagaactcccttaaagagctgtggtctttgctacatttcattatgcca
gaaaagttttcttcctgggaagattttgaagaagaacatggaaaaggcagagaatatggt
tatgcaagcctccacaaggagcttgaaccatttctgttacgcagagttaaaaaagatgtg
gaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacag
aaacagtattacaaatggatattaactaggaattacaaagccctcagcaaaggttccaag
ggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaattgattcttcttgacaaactgttaattcgcctaagagaa
cgaggcaatagagttcttattttttctcaaatggtgcggatgttagacatacttgcagaa
tatttgaaataccgtcaattcccctttcaaagattagatggatcaataaaaggggagctg
agaaaacaagcactagatcattttaatgctgaaggatcagaggatttctgctttttgctt
tccacaagagctggaggtctaggaattaatttagcctctgctgatactgttgttatattt
gattccgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattggg
cagaagaaacaggtgaatatttatcgtctagttactaagggatcagttgaagaggatatt
cttgaaagggccaaaaagaagatggttttagatcatcttgtgattcagagaatggacaca
actgggaagacagtactacatacaggttctgccccgtcaagttctactcctttcaataaa
gaagaattatcagctatcttaaagtttggtgctgaggaactttttaaggaacctgaagga
gaagaacaagaaccccaggaaatggatatagatgaaatcttgaagagggctgaaactcat
gaaaatgaaccaggccctttaactgtaggagatgaattgctttcccagttcaaggttgcc
aacttttcaaatatggatgaggatgacattgagttggaaccagaaagaaattcaaagaat
tgggaggaaataattcctgaagatcaacgaagacgattagaagaggaagaaagacaaaag
gaacttgaagaaatttatatgctcccaagaatgagaaactgtgcaaaacagattagtttt
aatggcagtgaagggaggcgcagtagaagtaggagatattctggatctgatagtgactcg
atctcagaaaggaaaaggccaaagaaacgtggaagaccacggactatccctcgggagact
atcaaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaagtttggt
ggccctctggaaagattagatgcaattgctcgggatgctgaattagttgataagtcagag
accgacctcagacgactaggagaattggtacataacggttgcattaaagctctaaaggat
aattcttcaggaacagaacgaacaggtggtagacttggaaaagtgaagggtccaacattc
cgaatatcaggagtacaggtgaatgccaagctcgtcatctcccatgaagaagaattgata
ccattgcataaatccattccttcagatccagaagaaagaaaacagtatactatcccatgc
catacaaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgtta
attggtatctacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctc
agtctaacacacaagattcttccagatgatcctgataaaaaaccacaagcaaagcagttg
cagacacgtgcagactacctcatcaaattacttagtaaagatcttgcaagaaaagaagct
cagagactttctggtgcaggaggttcaaagaggagaaaagcaagagctaagaagaataaa
gcattgaagtctgtaaaagtgaaagaagaaataaagagtgattcttcacccttgccctca
gagaagtctgatgaagatgatgataaggatgagatcacttctgtgaaacatccaaataaa
aaaattaaaacagaaagagacagtgaagaaagacctgagccagatgtttttataaagaag
gaatcagaagaaaagagggaagcaaaagaaaaagagaataaaagagaacttaaaagggag
ctaaaagaaaaagaggataagaaagatttaaaggaaaaagattttaaagagaaaagagaa
aacaaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttgagtgaa
tccaagtctgatagcaaggaaagatccaagaaatcttcagtgtcagatgctccagttcat
atcacagcaagtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaag
acattcagcatttgtaaagaaagaatgaggcctgtcaaagcagctttgaaacaacttgat
aggcctgaaaaaggcctttcagaaagagaacaactggagcatactagacagtgtttaata
aaaattggagaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaatcaag
cagtggagaaaaaacctgtggatttttgtatctaagtttacagagttcgatgcaagaaaa
ttacataagttatataagcatgctattaaaaaacggcaggaatctcagcaaaataatgac
cagaacagcagcctgaatgctcaagtaattagaaatccagatgtggaaagattaaaagag
aatacaaatcacgatgatagcagcagggacagttattcatctgatagacacttatctcag
tatcatgatcatcataaagaccgacatcagggagattcttacaaaaagagtgactctagg
aaaagaccctattcttcctttagtaatggcaaagatcatcgtgactgggatcattacaag
caagaaagcaggtattatagtgatagagagaaacacagaaaactggatgatcacaggagt
agagatcacaggtcaaatttggaaggaagtttaaaggacagatctcattctgatcatcgt
tctcattcagaccatcggttgcattcagaccatcgggcaagttctgaatatacacaccat
aaatcttccagggattataggtatcactcagattggcagatggaccacagaccttccagt
agtggccccagatcaccactagatcagaggtctccttatggctccagatctccatttgaa
cactcagttgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
