Puma concolor (puma): 112861971
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Entry
112861971 CDS
T08890
Symbol
COL11A2
Name
(RefSeq) collagen alpha-2(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04820
Cytoskeleton in muscle cells
pcoo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112861971 (COL11A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112861971 (COL11A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcoo00536
]
112861971 (COL11A2)
Glycosaminoglycan binding proteins [BR:
pcoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112861971 (COL11A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
112861971
NCBI-ProteinID:
XP_025780929
UniProt:
A0A6P6HZ76
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MERCSRCHRLLLLVPLVLGLSAVPAWAGAPPVDVLRALRFPSLPDGVRRARGICPADVAY
RVSRPAQLSAPTRQLFPGGFPKDFSLLTAVRTRPGLQAPLLTLYSAQGVRQLGLELGRPF
RFLYEDQTGRPRPPAQPVFRGLSLADGKWHRVAVAVKGQSVTLIVDCKKRVTRPLPRSAR
PLLDTHGVIIFGARILDEEVFEGDIQELVIVPGVQAAYESCEQKELECEGAWRERPQKQH
SHRAQRSPKQQPPRLHRPQNQEPQRQPTESFFYDYETPYYDEMTTGTTPDYQDPTPGGEE
GTLEPSPLPPHEEEQTDLQVPSTADRFLTEDYGEGGTDPPAGPYDYTYGYGDDYREETEL
GPALSAETAHSGAAARGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPG
PVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQ
ARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRA
GADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPR
GLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLP
GPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPR
GVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGPT
GDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGER
GPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKD
GLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLTGTS
GKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGIAGGPGLKGNEGPAGPPGPAGSPGER
GAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVA
GEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAK
GDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPP
GGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDD
GPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKR
GPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGRP
GAPGQAGPPGPVGPPGLPGLRGDVGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSA
GQKGETGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPAGPKGEKGVQGPPGHPGPPGEV
IQPLPIQMPKKTRRSVDGSRLMQEDEAIPAGGAPGSAGGLEEIFGSLDSLREEIEQMRRP
TGTQDSPARTCQDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDVT
QFSYVDSEGSPVGVVQLTFLRLLSVSAHQDVSYPCSGMARDGPLKLRGANEDELSLETSP
YVKEFRDGCQTQQGRTVLEVRTPVLEQLPVLDASFSDLGAPPKRGGVLLGPVCFMG
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtgcagccgctgtcatcgcctcctcctgctggtaccgctggtgctggggctg
agcgccgtccctgcctgggcaggtgcaccccctgtggatgtgctccgggccctgaggttc
ccctcccttcctgatggtgtccggagggcgagaggcatctgtccagctgatgtggcctac
cgagtgtcccgacctgcccagctcagtgcacccacccgccagctcttcccaggaggtttt
cccaaagatttctcattgctgactgctgtccggacccgccctggcctccaggctcccctc
ctgactctctatagtgcccagggtgtccgacagctgggcctggagcttggccgacccttc
cgcttcctgtatgaggaccagactggaaggcctcgaccccccgctcagccagtcttccga
ggcctcagcctagcagatggcaagtggcaccgtgtggcagtggctgtgaagggccagtct
gtcaccctcatagttgactgcaagaagcgagtcacccggcctctcccccgaagtgctcgt
ccgctgttggacacccatggagtgattatctttggtgcccgtatcctggatgaagaagtg
tttgagggtgacatccaggagcttgtcattgtcccaggggtgcaagctgcctacgaatcc
tgtgaacagaaggagctggagtgtgagggagcttggagggagagacctcagaaacaacac
tctcacagggcccagagatctccaaagcagcagccaccaagacttcataggccacaaaac
caggaaccccagcgacagcccactgagtctttcttctatgactacgagaccccctattat
gatgagatgactacagggacgacccctgattatcaggatcccaccccaggtggagaggaa
ggaaccctggaaccaagccctttgccaccccatgaggaggagcagacagatctccaggtc
ccctccacagccgacaggttcctgacagaggactatggggagggtggcacagacccccca
gcagggccctacgattacacatatggctatggggacgattatcgtgaggagacggagctt
ggccctgccctgtctgcggagacagcccactcgggagccgctgcccgtggaccccggggg
ctgaagggagagaagggggaacctgcggtgctggaacctggtatgctggtggaggggcct
cctggcccagaaggccctgcggggttgattggtccccctggcatccagggcaacccaggc
ccagttggagaccctggcgagaggggcccccctggccgagcagggctccctggatcagat
ggggcccctggacctcctggcacatcgctcatgctcccattccggtttggcagtggtggg
ggtgacaagggccctgtggtagcagcccaggaggctcaggcccaggcgattctgcagcaa
gcacggctggcgctccgaggaccccctggccccatgggatacacaggccgccctggaccc
ttgggacagcctgggagccctggcctgaaaggagaatctggagacctaggacctcagggc
cccagaggacctcaaggcctcacaggccctcctggcaaggctgggcgaaggggccgagca
ggtgctgatggagctcgagggatgcctggagaaccaggagtgaagggtgaccgaggtttt
gatggactcccagggctacctggggagaagggacataggggtgatactggtgcccagggc
cttcctggcccccctggtgaggatggagagcggggagacgatggggagattgggcctcgg
ggactgcctggagaatcaggacctcgaggtctccttggccccaaaggcccacctggtatt
cctggacccccgggagtccgaggcatggatggtccccatggtcccaaagggagcttggga
ccccagggagagccaggacctcctggacaacagggcactcctggaacccagggtctccct
gggccccagggtgccattggccctcatggagagaagggtccccgagggaaaccagggctc
cctggcatgcctggctcagatggacctccgggtcacccggggaaggaaggtccccctgga
accaaaggaaaccagggtccatctggacctcagggtcctctaggatatccgggacctcga
ggtgtcaagggtgtggatggaattcgtggtctgaagggccataagggtgaaaagggcgag
gatggctttcccgggttcaaaggggacatgggtgtgaaaggtgacaggggagaggttgga
gttcctggttccaggggagaagatggtcctgagggaccaaagggacgtactggacccact
ggagaccctggcccccctgggctcatgggcgagaagggcaagctgggtgttcctggtctg
cctggctaccctggacgccagggtcccaagggctccctgggatttcctggttttcctggc
gccagtggagagaagggagcccggggcctgtcagggaaatcagggcctcggggagagcgg
ggccccacgggtccacggggtcagcggggaccccgaggtgccacggggaagtctggagct
aagggaacatcaggtggtgatggcccccatgggccccctggagaaaggggtctccctgga
cctcaaggccccaatggatttcctggccccaaaggacctccgggtccccctgggaaggac
gggctgccaggacacccaggccagagaggagaagtgggtttccaagggaagactggcccc
cctggccctccaggggtggtgggacctcagggagcagcaggagaaactgggcccatgggg
gagagaggtcacccaggacccccggggccccctggagagcagggactgactggaacatct
ggaaaagaaggaacaaagggtgaccctggtcccccaggggccccagggaaggatggacct
gctggtctgagggggttcccaggagagagaggcctcccgggcattgccggtggacccggt
ttgaagggaaacgaaggtccggctggtcctcctggccctgcaggctcccctggggagcga
ggtgcagcaggatcaggcggacccattggccccccagggcgccctggcccacagggtccc
cctggagctgcaggagagaaaggtgtcccgggtgagaagggccccattggtccaactggc
cgagatggggtgcagggccctgtggggcttcctggtcccgctggacccccaggcgtggca
ggagaggatggagacaagggtgaggtgggagaccctgggcagaagggcactaaagggaat
aagggtgaacatggccctcctggaccccctgggcccattggtcccgtggggcaacctgga
gcagcgggagcagatggggagcccggagctcgggggccccagggacactttggagccaaa
ggcgatgaaggaacaagaggcttcaatgggcccccgggacccattggcctacagggtttg
ccaggcccctcgggggagaaaggagaaacaggagatgtgggccctatgggacctccgggc
cccccaggacctcgaggcccagctggacccaatggagctgatggtccgcaaggtcccccg
ggaggtgttgggaacctgggtccccctggagagaagggggagccaggagaatcaggatct
ccaggggtccagggcgagccaggtgtcaagggcccacgtggggagcgtggggagaaagga
gaatcagggcagccaggagaggccggaccaccagggcctaaaggccccaccggtgatgat
ggccccaaagggaaccctggtcctgttggttttcctggtgatcctggccctcctggagaa
ggtggccctcggggccaggatggtgcaaagggtgaccgaggagaggatggcgagccagga
cagcccggatcccctggtcccactggggagaatggaccccctggaccacttgggaagcgg
ggtcccgctggcacacctggtcctgaggggcggcaaggagagaagggggccaagggggat
cctggcgctgtaggtgccccggggaagacaggccccgtgggccctgcaggcccagcaggg
aaacctggtcctgatgggttaagaggtctcccaggctcagtgggtcagcaaggccgtcct
ggggccccaggccaggctgggcctccaggtcctgtgggacctccggggcttcctggcctc
cggggtgatgtcggagccaagggagagaagggtcacccaggtctcatcggactgatcggg
ccccctggggagcagggagagaagggtgatcggggacttcctggcccccagggctccgct
ggacagaagggagagacgggtattccaggagcgtctgggcctattggtcctggagggccc
cctggcctccccggacctgctggccccaaaggagccaaaggagccacaggcccagctgga
cccaagggagagaagggcgtccagggtcctccgggacacccgggccccccgggtgaggtg
atccagcccctgcccatccagatgcccaaaaagactcggcgctccgtggacggaagccgc
ctgatgcaagaggatgaggccataccggctgggggggctccgggcagcgctggggggctg
gaggagatctttggctcactggactccctgcgggaggagattgagcagatgaggcggccg
acagggacccaggacagccccgctcgcacctgccaggacctgaagctctgccacccggag
ctgcctgatggagagtactgggtcgaccccaaccagggctgtgctcgggatgccttccgg
gttttctgcaactttacagcaggaggggaaacatgtgtgacgccccgggatgatgtcaca
caattctcttacgtggactcagaaggctccccggtaggtgtggtccagctcaccttcctg
cggctgctcagcgtctcagcccaccaggatgtctcctacccgtgctctgggatggcccga
gatggtcccctgaagctccggggggccaacgaggatgagctgagcctggagaccagcccc
tacgtcaaggaattcagagacggctgtcagacacagcaaggccgcacggtgctggaggtg
cgaacacctgtgctggagcagctaccagtgctggacgcctccttctcagacctgggggcc
cccccgaaacggggaggggtgctgctggggcctgtctgcttcatgggctag
DBGET
integrated database retrieval system
